Anopheles gambiae AGAP006601 Genomic Evodifferences Profile - Relaxed EvoPrint

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Black capital letters represent bases conserved in all species and colored bases represent sequences present in all species except Culex pipiens or Aedes aegypti


    Reference genome repeat sequences: Blue underlining indicates single-copy repeats and Red underlining identifies multi-copy repeats.


attcgtgtgcgcatgtgtttgtgggtgtgcgtgtgtatgtgtgtgtgcttgtggacgtcgagatcggaatccctc
gaacctcatggacaggaagggaagaagagaagtgagcggaggacacacacacacacacacagcaagctttgactc
tgtatatctttgtgtgtgtgtgttagacgcgtgtgtgggatgatacttttcgaaaggtttttcgaaatttccaga
acctagatccttgggaaaagccgaaggaaaattggaagcgaaagacttgttacatctctacaaaaaaaaaaaaaa
acacacacacacacacacacacaccggcaccacggtgaccttcggaaagctttccaggaaccgggttaccacttg
ccaatgaaaactacactataggagggatggaaaaaagatgtaacttttccatcgggttgagttaccgcactaaaa
atgaattccaatgaaaactagacattccgattcgaagaataacacgatcgcaacaagctctgctgctttttgcag
taggttattgacccatttaagggtaaggtgaagttaaaagtaaacgtttatcattttaccacaagctgagtaaat
aaaagggtcaacatctctcttcagtttgtcatcttcgagccagacgagcgctgccggcaaaaggaaagcatttga
acccaaacaaaacctcactgaagcgtttgcttgtccctaaaaagggaacaacacagacacgcattccagctgtag
ggtgatcttgcctcagtgtgtagtcctttaaccattcgcttactgtcaaaaatcatctttctttgatgttttaat
ggtagaagcgacgttatctcatgctctgcagaacacagaaacacatgtgcacagagggctctgcacggtacagtc
ttgcccaaaaatacaatattaatgttacactaaaacaagtacacacacacacacacacacacaccaatacacatc
caaagcccttgccaagaagcaaaccgcctcttgtagacatttcgaaagagacttcacaaaatggcggcgtacgat
ttttccgaccacactgaagagccggaaaggcagcgggaggaaggaggaagaggtctcgagtaaaggtggcctaca
tcttccttcccctgccccccccccccccccccgcacactcgctcgaatgattattgccctctctttctcgctcgt
acagtactaccgggtacgattgcttcgctccgttattaatcaagttgaagatctaacaagcgtcgatgtgggggg
gaggcgatgagttttccaccaaaagaaagccttaacacatctacctctaatgcaatcgaagaaggccacaccgcc
accatctgccattgatttccgggtggatggtggtgcctgtgtgtgtgtgtgtatgttgagtgcagctatagctgc
attgctggcagaactgcagaaaggattgttatggatgatgttgtggcattgaaatccctttctttgctggactcg
ttgtcatgcatccctagtagagtttgaattttgaagaattctcaattctgcaaaacttttcacccaatggcgcgt
gtctactctcttgatcgcgcactcgcctgcagttcacatgatgtcccttttgtccaccgaatcttcctggatgtt
gttgttgttgggtggaaaacagcgagagcaaaaagatctcccaataaaacaatcgttggcggcggcgatgcagag
ttgctgaggaaaaacggaaaatatttccatcgttgttgtctcctcccccgtccctgttgcgttgtacccttgaag
cctctctagtagatcttttccgaatgttaggtcggcagaggaggagaagaaaccgggagaagacaggagggaaga
gagacgttaaatcggcatcgtgtgctattggtaTCTGTGTGTGTGTgTGTGTtccgttgttagggtgaaggttgt
caagggaaggtaagttggtgatggttgtgaggggggtgacgttgttgctaagagatatctccttggtgtgtagtg
tgggctgctggctgctgctgcctttttgctgggacacaacccggatttgcgaagaagtggaaaaagcaacagaga
gacgctgcctgcggagaggggcgaagtgtatgcatagaagaagaaaaggctaccggtggcgccatctggtggccg
ttcggtagtacctcgggtcatacacacacacaccgagtatgcaagatagcgctcgtgggacaggccggcagcgag
agcgggatggaaagaccgatttggattgtggcgcgcggttcttttctggtgggccacgctggccccgttcttcgt
gtttcTGTGTGTGTGTGTGTGTGTATGTGTGcGTGTgttgagccccttTGTGTGTGTGTATGacgctgtcaattt
ccaccgtgcggtgcccgaatgttccgatatgcttttacttggacaaaccccttTTTCTTCGTcgcTTGCTGCTGC
Taccattgttaccgaccgcaaaacgttactcaccgatggaactggttcttgtcaaagatcttcaaggacgaatcg
aatcgaacaaatatccggagcaatcctaatctctttgACACACACACACGCACcACACAGTcagaagaagatctc
tgCAAATGCCGACCtcaaacttgaaattggttgctttgatccaattggctttttgcaggatagttgctacgattt
aaacgcctttcttcatcgcttagatcgttggacaaaggcaccattgatccacgtaggtctaggtttctaaacggt
acagatagaatcggcaaagagTCAAAGAGcAAACAggcAgGATCTGGCCACCATccttcaatatgattgtttttg
aggtggccataagcatcacacaggtaaagaagacgcagcggacgcgggacgacgcttcggagagtttgcaaaaat
tattttgacgctagtccgtgtccaccattttgtgtgtgtgtgcgcctcgggatcttcctcaccgttcgcaggtcc
ctgccaaaagggggtgtgtggtgtgtaacgaaggtaggagaagaagggtgctgtgcgaacgatagacacggacag
aaaatggcgcaaatgcgacgaatgcgttagagcgcgaaAGAGATAGAGAGAGAGAGAATGGgcaagaagcagcca
gcagaagaagggaacacgaggtgcggcggcggcagtggtgcgcacaggcaggcaggaccggagaggggtttggta
acggggggcgtgcatgaagaacggggtcagcggggaagaacgtgtacaaggagaCGACATGCAGCAGCAGCgGCA
GCggcggtggcatggtctctgcccgggaagagaagccggtagccggtaaggggacgcgcgcgcgttggtgacgag
gaggggtaggatggttggttggtgcttgcggggggagcgtacatttttgagagaaagagaacgaaccccgctgac
gcagcCAGCAACtgCAACAACAGCAGCAACAACAACAGCtcagttgttgaggcgcaGTAGgcTAGAGcggGAGAG
AGAGcgagcgagagcgtgcGAGAGAGAAcgAGCgAGAgcagaaccgaatggggcgcacgctaggggtAACGAGAG
AGAGAGAGAGAataagcgttgagcaagagaatgtaaggtgggtgggaagggtgaggtgtggagtggagggttgat
gatagtcagcagaaggaagaggatgtgggaaggtgtgtggaggggcttttttggatcgcattgcgcgggaggggg
tgtgtgtgtgtgtgatggagagacggatgggagcaaactgggtagacacgtggcatgtatagaggggagaggagg
aagcggtcgagcggatgacaagcaggggggatgaagcaggcaacgcacagagagaacgaacgatccccgaagtgt
ctgggggtggtggtggtgtggagacccgggcagggattgaatttggtatgtgtgtgtgtgtgtccaggggaggga
ttttggaggcggacgggcaggacagggatgacgttttgcaacaccagaaccataccagccgggagggcggccggc
ttctggcggcgggtggatctgcttctgccttgccttgctcggagcggccaagggcgccgaggtgtggtgcacaga
gagagagagagaggaaagggacacaggacatagggttccataggaggtccatattctactatccttgctggtttg
gcgagccagaatggacaacggcacgatggggtacggtaaaggcgcggacaggaaggtgaaggagcagaagttatc
gattagttctccccagttgggaggtggagagggacacggcacgaggggaaggagtacacgctcggggggtagggt
tttgcggcaagaagttgatggtagagatcatgtttttttttacacaaggtttgtgtgtacgtatttgaatttgta
taggtgtctgtgtctgtgtgtgtgaatttcatttcctgtactcatacagttatggatagtctctcttctgtatgt
gtgtcgagatttggtgtgctactgggctcgacaatcgtgtgctggcttttcccatttatcctctagcgctgcctg
ctggattggaatggattggaatggccttttcttctggcaaataatgcaacggccgggctcagccatcgggtcgat
ttttcggttgtcactactttacagccctgggtcaagaatatgaggaaaagagaaataagagagcaaatattgtaa
aaacatgttgtaaattaatagctaaatatcaagtcttatctacctttacacagttcttacttatagagagcttac
tgaaacactgaataaagcaattgcagtacaattcctttctaatcacaatttttgccttttttcttttttttagat
caatttccatctcatcgttccgctggcaaaaccccgcgtccaaacggcggcgtgaagagcgatccttagcatagg
ggaggagacacccaagcgccgtcaccgtggcgtccgacgacggcgaggagatgggcgaggtcggtgcgaatgcaa
cggaatcgactgcaccaccaccaccaccggcagcagacagcaacagcaacagcagcagcagcaccagcgagccaa
aggagaatggggaagtgaacggcacggcgacggacaagactgccgtcaccgataatgcagccgtagcggaggaag
acaacgacgacgaggaggagctgctgcacgaggaagcagacaaaaatggcacaaacagtgaggctgcgaacggtg
aaaagtcagcaacagagccgcaggcgaacagtgatgtagcgccatctggggaggaaaagttgcacagcaacgctg
ccgacaggttgggcaaaaaggaagcagcagagccaacggagagcagtagtgacgcgaccaatccaagtagtcgaa
gtggcgaaggtgacgcgtgcggcaagacagaactgtcgaagcaggcaacggaagagaagaagctatctacgagca
gggagtcggacgagatcgaaaccatggatgtggacgaagaggaggatgacggtgacgttgttgcggtggacgctg
agaacggcacagcaaacggttcgcctggcggggatgaagaaccaccggtggtcgctgctaagcagccgcagcagc
aggtgacggaggtcgacgacgatgagccgatggaggtggacggtggtgatgagcaggatgcggctgccgcagccc
cgaccaacggtcacaaggaatcgaacgccgacgaggatggtgcgaccgtgcggtcggaaaagcttaccagcagta
aaactgcagcggaaaaggataagagcgaaccaccgacgcatccaccatcaaagcaaccggcggatgacgatgcgg
aggaggaagaggaggatgacgacaaaccggtcagtattaattccgactccgagggtgaggaatcgccccaaaagc
gggacagcggcgaaccggtggcggtggcggacaaagcaaccaagccagcaaccaacagtaagctaatcctggtgg
acgagggtggtttggcgaagctgaacgaggctgtgcccgccgcagcagcgtcaaccgttgccgggggagatgcga
gcgctggtaagaagagtgacactgtacctagcaacggggtggtggtggatggagcggcagcgacggctactcgta
cccagaacggtgactgtgatggggatttaacgatcctgagcgacaaggaagacgactgcgtggtgattgaggacg
atgacggcgagtcggacgcttccgtgccggccgtccccgcgaacaacgcgcggcgaagcggcagtatacgagcga
cgggtggccgaaagtcggacggtggtgttggtggtggagccgcgtcactaatggcggggtcagcaatcaatccgc
ttgccgcggccgccgccgcgttgcagcagcagcagctgaaccagagcatcgtctcgtccatggatgacgacgacg
aggacgaggacgacgatgatgatgatatagaggaaatcatcgacgatccgctggcgttgggaacgcaggcgacca
acttgagcatgggcgggcgcggctaccaaccgaacacgccggtcaacctcaagggacagaaatcgctgctaatga
acaatgctgctggtggtgccgccggtggtaaggagccaacgctggtgataatcgataccaacacaatgatgaaca
atggcggtggcgcgcaacgcggtgcgacgaatctggcctctgccggggtgacgtcaccgaacgtgaacagcaacg
cggccaatctgctcgcgaaggcaagcagcgccggcatcctttcgaacgcgagcgccagcccgggcgcacagttca
actcccgcagcctgctcaactcgcccggcgtcgttggtaactcgccggtggccaccgccgccggtgctgcaatgc
taaaccagggcggtatgctgggcaaaagtgcggccgccggctcagcgTTGGCcCCGGTgACGCCgctcctgcCCG
CCCTtACcGACGACATGTTCGTGCTGGAGGCGCCGTCCTTtATCGTGCCGTACATCTACGAGAAGCCgCCCgCGG
AcAAtcTGCGCGACATCGTCgaCGAGCTGGAggtcacgatcaaggagatgcgcaagaagctcgaagagtccgggg
cggtcccgcctgcagccagcaagcagcagggcggcgacaccgccgaacaggccaaggaggacggtgcgaagaacg
cggcagcagcagcagcggtggctgcctcgctctacggcgacaaggagtcggacaagagcaaaaacaacaagaagc
gaaagcgcaacaacgatgACGAcGACGAcTGGGACGAGCTGGAAACgTCcACcGACGACGAGGCgTCGGACGAGG
AGcAaAAGACGAAGGTgCTGATCAAGGAGGCgagggCGGACATCGAGgcGATCAAGGAGCACATCATCtcgcCGT
CGgacAAGGACGATCTGACCggagTCGGCGGTGGCGgCGGCAGCAGcggcggcgccaacgggagCGATCCGAAAA
AGTCGGAaAACTACTTCGAAAACCCGCTCGGcAAGTTCTTCATGAACATCGGCATcAAtCTGGTGCAGGAGTTCG
TgCAGACGGATCTGCTGCGGCAGCAGAAGcgcAAGcgcGACCGGGAGGGCAAACCgTCGCCgAGCACGCAGcTcG
CCATCAACTCGCTGATGAAGAATCTCGAGcaGAGCAAGGAGAACAACAaACCGTaCAAGTTCGAGATGAAgCGGT
GCGAGTACTGCCCGTTCAAGTCGGAgTCGGCGCTGGtGATGGCgCACCACTACGAGACGCCCCACATGCGCAACT
tCATCTACAAGTGTAACTTCTGCgCGTACGAGACGCGCCCACCGCACGACATCCTGTACCACATGGAGGCGgTGC
ACAACATCAAGGGgCGGaTGGAGAAGGCGCTGTCCTACCACcaCTGcCCgAACTGTCCGTTCGAGGACAACGGgA
AGTCGAAGCTGGCCCGCCATGCgGTcGCCTGTGCGAAGAAGTTCCGGCCCGAGcTGAACCTGAACCCGCCgATGG
ACTGGGAACCGCCGGCaAAGATaCCGCGCATCAAGCCGAAGCACGGtCTCGTCGGtACGGCAACGGCCTATCAGG
TAAGcaggggagatgaatatgaagagtgtagcgatctggaagagaaagagtaaccggtttgTGTGTTTGCTCCac
ttttTAGGCCATGACCGCACAGCAGCAGAAAAACATtgcccttgccaatcagcagcgcctcaaccagcagcaggt
cgcgtcgtcggcggttcacctgcagcagcagcagcacctcagccagctgcagcagcagcagctggtcggccagca
gcatctcgggctggctggcacgaatgcggccgccgCCaCGCTCAACAaTGtcgcgctggcgAACCTgtCGcCcGC
cGCCCAaGCcGtcGCCATACGGGCCCGtgCGGcGGcGGCcggtctcgggggcgctggcagcggcggtgtcggCGG
tCTCGGTGCcggcggtggcgtcggcggtgctggtggtggccgtgcccctgccatcatcccgtcgcccacgggcat
tacgggggccggtagcggggtgcgaggggccggtgccgtTGCGGGCCtGGgCGgtggcctgaatgcgacCGCGCT
CgcagcgtcggccgccgccatccggaacacgcTCGCCggagcaGGAATGGTAATACCCAATAACcTTCAGCTaTC
gGCAtCGGCatTaGCCGCTGCtgcCGCTgcgggaggatttagtaaataTCTGCCGGTAAATTgCCatcccttttt
TTCTTTATTTctttactttcaattggaTTAgTTTATTTACTTcTAagagtttaatttccgtaactgagTTCTTTt
gcaaagctcactaatctcacatacacacacaaactaatcaaggtttttctttttggcatttagcaggataatgta
aacactgaagtatatggttgttgtaaaaaaatgcatttatttaatgaaatccccaaactctcgtatgtttatggg
tcacattgtagttaggtagccttactttacgggtcgcttttttaaggtatgacgcgaccatcttcaaacgatgca
aaagctggtaaaagttagctgtagcttgatttaaatttaatttaactgtatcttactttcttcaatacacatttt
cgacacaaccaaaaaggggattgccttttccggtggagtttatgtatagcggaatttgggtgcaagtgtgtcatc
ttaagcatttcatgttcataactcactaaaacttgttaaatattttctcgttttttagagcttatttggtatggt
taaaaaactataatttttagctcaattatgatactcaacataaagcagttcaaaacaatgggaaaaatcgattaa
tctatatgaatggtattatggtacagtatacctagccatgagaacaaaaccatctgtatactcaataggtcatat
aactcaagctttaatgggaaaaatgcttgtgggcactcttgccccaaattccgctacatgaaaatacactcaaac
acaactagaatcttattggcgcgggagagcgcgcgcgtgtagcgtatagctgccgccgcctaatattaaatgccg
cgtgtgtgtgtacctattgaaactaattttattcctttcttttttctattctttttttttcttttcctttgtgtt
tttctttcccttccccaccactccttcccaccctctctatgtgtgtgtctgtgtacgcgccttaatgtaaccccg
gtttttctccgtccctatgcacctgaacaaatgtttgtccacacactctaacacaacactacacacatccctcac
catcatccccccctcaacaaactattccgaatgtacacaaatcccgaTAGAAATCAATCAAcaacgccggacgat
cacttctaaccaattccaatgcgtccatcacaATTCAGGTTGGTTTCAGTTtccaaTTTCAGTTTgtatcgattg
cttttttgTTgTTgTCGTTGTTTggtttgttcttttattagtatacttgtttacttatgctctagtttagttttg
aatcctttattcgtgtgttggcgctttcctccttccaatcgggttcagtagtggggcttctctaaacattccaat
gaaatgacttttcgcaaacgattcactaatatatatttactctttcttttccctttttacacatggcattctcac
acacacacaaacagaatgcgtccagtatgaaggcgaccaagacggcCCAGgCGCCgAGCATCTCgATCACGCCCC
TGCCgCGCCAGTCCGCCtcgaacagcagCAGTgCGGCGGCCAACATGtCCAACATtGCCGGCGccCTGTCGAAGC
TGCAGGCccagGGtACGTCCGCGGTCAAGCCCGGGCAaAACCCGagCGGCGGCAAGAtgGCgTTCGTGGTGTGCG
AgATCTGCGACGGcTACATCAAGGATCTGGACCAGCTGCGCAACCACATGCAGTGGATACACAAAGTgAAGGTAc
gttgtgtgtggggggtagctttgccctttgcgtggcattccgttgaatttatggccttttttacacacTGTTCGC
TTTTCTgCTTTTTTCTAGATTCACCCGAAGATGATCTACAACCGaCCGCCGCTGAAtTGcCAAAAGTGTCAGTAC
CGGTTTTTCACCGATCAGGGCCTGGAGCGGCACCTGttaGGCTCGCACGGctTGGTGACGAGCTCgATGCAGGAG
GCCGCCAACAAGGGCAAGGATGCtGGCCGcTGTCCAGTcTGTGGACGGGTgcgtaaacgctttctcttcatcatt
gcagtgccgTTTGTGCTAAtCTTCTtTCCTCtTCAtCCTCAGGTGTACCAgTGGAAGCTGCTtAATCACGTGTCC
CGCGATCACAACATGACCCTGAAACCTGCcCAtCTCTCGTACAAaTGTACCGTCTGCACGGCCACGTTCGGCATG
TACAAGCAGTTCGAAAGcCACGTcTACTCcGCGCACAGtACGGTCGCGAAAAAGacgggcgaagggaagggcagc
aagggtggcggcggcagcggcggtggtggcatgggacagcagcagacctcatccggcatgggtagcagtggtgga
tcttcatcttcgggcggcgctggcggactgaggaatccGTTCGTGGGCGGTGGCGATTCGCTGCTGAAGCCGCTC
AAGATtAACGACGAaATCACGATCATCCCGCAGCCGACCtccaacAGCAAGatGGCGAAAaCGATcGAgcTgGAA
AGTCAcGTcATAGGTGAGggatgaactagggcaatgcagttcaaagaatccgtatcacattttaaccgatttctc
ttctttgtagattaaacatgacgataaaaacataaggtgagccccttttaagccacacacacacacacacactac
gactgccgaggatttggacgttagaggccacgtgtagatgatgaaccgatatctggtggtcgacagacagagtga
caaagagacagaggacattcagggagggcaaatgaaactccttctaatcttatcctttgatactccccattacca
atggccgcctctaatctgtttgtggtttccaatgcataatccattgccatcgtcaccccccagtcccacacacgt
acacaccacaaataacgggattgtacgggatttggggttgtgacggtggtggtgtggatggaaacactggtgtgt
aagcatcgcaccttcggcgttaattgtgcaactccgggggatgcgaaccggtatgaaaaagcggaattttacagt
ccattattttctttctactacatacacagtttcatttaggtaatttaaaaataaagtaatattaaagcagcagaa
gcaggatcagagtgtgcagaagagagagtagagagagagagagagcagagagaggaattagggctagaggcgact
aagcgcgcgttgtaaagaaagggaagaagcaaagcaggaaaaaaagaaaacctatgtaacaaattcgaaattaaa
tcatgtatagagttaataaccaacagcaaatggattgtttttttttatcgtcttcgtctcccgtttttccccgtt
tttcttttttataaatatttgaactttcgtgtttttgtactcgggaggacaagtcttaggacgtcttcgatgctg
taagcccttgtgtattagcttatttgtaatttacttttaaagtttactcctcttcttctaccaatccttcgcttc
tcctcctcctaagaatcgtaaagacgcaccggcagcaatgctcttatggctcatttcttcgactatcatcacgct
tccacgatggcacagcaattgtgagcaaaaaaaaaagttcctagagattgtttcttctttttttgcttcccatta
tcgaggaagcttcgctgcacacgcctctctaataacacacgaccattttgcgggagcttgaaggatgttgtacaa
cgagcaaaagccagtgttgtgtatgtatagcagtcaaaccttacctaccaatacgaaagtgggaagcgtttacca
cctccagggccagtgcagagtccacaccgtgatcagttaccgttgtgttgtgcgattgcgttgtgtttgtgagtg
tgattcgtggttttataactttataaaaatttgcagacaactcacgcgttaaaacaacaacccctactactaacc
caagcagcagtagcaaggctaatattgttagcggcttggcaaactctaacaaacaacaaacagacacaaaaaaac
acagcagaaatgggtagtgtgtagaatgggggaggaataggtttaggctaacgagtcacactcaatcagctaaat
ccggtttggatgtgacgaaaaatagagttagtgtttactatagggtaaagtcggcagtagtagtagcagcaggca
gtcaaactctcacacagcgagagcagaaagcttttcgtttatcgatgcaaagtaaggtttggagggaagagagag
agagagagagggaaaagacaaaaagcaattgtaaaaaaaatcccctctaaaactatctaactcacgtgcgtgttt
gctcgagtttaaatgctaaaagacacttgtaagaagttaaagcacgatgaaaagatggaactagcatcattgaaa
tgagaaacgaactcataaaaaaacaagacaaaagaaaagaaagaaagaaagaaaagaaacaaaggaaaacatcaa
ctctttaccaatatgatacgaggacgacacaaacacacagattctttataaactaaataaacagagcagataata
attgaagcagagaattgttccccgtcacatcgcctccgaacgcgctccatttgtccgatcgcggcaagtccgggt
gtgctgtttactctgtctatctttggttggtgggtaaattccaaccccctctctgcgtgagtggcggtgatcttc
tccccttcaaacgctcccaacaccgtccagccaaccggacggacacacgatcctctaatgcccttttgatttgct
atcacaagcccgaaagtgctaatgaatgattgatttgatggcgttgtgtctgacggcattggaaccgattgaaaa
catctccttagtggaatatcggttcggatgatgatcaagattgttgttcttgtacttgaattgttgatcgcgtgt
tgactcgacaatggttttgaattgaacttcaaagatgaatgaatggatgacacagcggtcttagtaaatagggtt
acttaggttgcattttgttggcaagatcacatcatcacatcacggcgatcgcgtgcaatattggtgttaatgaat
gaatgcgcctggaaactcgggtatcacactatcgctatctatttttgctcaattttggattataataaatcaata
tcgattgagatgactcatcgagaccagttttagagcctaccaaccataagaaaaagaaactctaattggaaccgt
ctcccacagtccttcgaacggggtttttggtgactgatcgtgatcaacttttgatctcaaaatgatacaacagtt
acgtaaattacaatatacaataaacaacacaaataattacaatttttaaaaacagcaatatattttacacaaaat
agtaggtatatcttatgctaaacacacacatctgccctttctgtcccttttactctacactcaatggttctccgc
ttccggcgttttcgccttgttcgtcagtccaacaaccgtctcgtccacgctcgccggcaccagcggttcgctcac
ggagctgccaaacggtaagctgctcagatcgttctgcccctgcagcaggacggccgcatcgctaatgttgtgctt
gtgcacctccacgtacgagctgttggtttgcgaaatgttcaccaccgtgccggcgatcggcagggcggacagcag
atcgctcagcttggtcggcacggtgccgacatgcaccggggcgataccggtgaacacctgcccctgcacgctcgt
ctggatgggcacgggaatgtcgcccagatcgaggtgcgtatcgttaccgccgtggctgaagaaggacagatcgac
ctgctggtggctgtgtttaatagaagggttagaaagagagcaaaaggcaatttgttacaacgatgacatacattc
agaagaggttgtttggggggggatggcaacgacacttacgtgattggttcatctccttcgagcgtttcgttctcg
ggcacgtcggccagaattccaatttcatacaccaccgctttgatcacgtacctaaaatgaagcgcaaaatcgatt
cattatttcaagggaaaaccctctcgaggagatgaactcccagttcagaaactcacaactccttggtagtgttct
gggtgctgttgccaccgatgagtgtcgcctcgtcactctccaccgtcgcaccgtactcgagcggactgtacagcg
agttgagcgggtagccttgatctttctcctgggacgaggagccggaggactcggaatgatcattcgggtgttccg
ctgggagtgggccagccacgacacagcacaccaccaccaccgcacaccatacggtaacggccaacttctgccaac
ccgtcgctcctttcgtaacaaccattgctgtgtctcggatctcgtttgttgctcaactttctgcggcggatgttc
acctgcgaatgacaccgttggccggcgtgttcgggcaggtctatttatatgagtgcaaatagagtgtccattttg
tcgtcgcccggctgcttcatgttttagcacgcggatgtgagagccactgtgtgtgtaggacgtcacaattaagag
catcgcgatcgctgtccgatcgaaatacacacagcaacggggccagctaattatcgggaccgggagaagattcac
accagacgtgtagtaggaatgggcagagggggagggggggggggtggccaatagtgacgatatatttttcgtatg
tgacaaggtgatgggtatattgaattcctacacaatgggtatcaggacgacttgttgagttcgatgtgaggatca
gctgttcctttcttctttttggtgaatcacccggattgctttgattgaaagaaaacaaaatgttgaaaacaatgc
agaatttgtttgtcgccacgttaccaaggtcctagaccacgtgttgggcatgaatattgtagttcctcagctaag
ctattttgtttgcgccgtgatacaggtcaccatctccagtttattaattagtaacgcctcagggatgctaaaact
atatggaaaacttttaaaaaattgtttaaattcctctgcatttcttactgttttcctacacaaatgttttgcgca
ttcatgttgtccgttagatgactgtttttcggcaacactgcaatgaatcatatatttctcgcccgatgcgcctac
attggcttattcacccggcgcaaaaatgtaagtgcacaactttattcacaattctgtaaaagagaagaaagaaaa
cacatcgaagaaggcgttgaaaaaacccctccccgcagcgcaaaaccgtgctgtgacgtagcgctaaattagtcc
ttcacgagcatgtgacgattgggagctgggggggaagagatgctaattttcacgacaacttcggctgtgctgtgt
gtgcccctcggacaatgtcaaccgttcgctggagagtgaagaagaacgacctttttttttttgaccgggcgtaca
ctacctattatcgtgctgctccgccggcgccggtgcataaaacgatagcaggaccgaaccagggccgctgctcag
aacttccgccgtctgtcttagtacgtttttatcgctcaaagaacggacatagggttgagcgctgccgagaacttt
tccgaagcgagacgagatgacccctgcagccagttttgtggtgcgtttttgagttgagatttaccttcgttcgta
ctaaaaacggtccatatccgtatttccctccctagctaagtgctgtcctactagcagccacgtccttcgccattc
cggtggctcagaatggcaccgggctcggtgcggcactcactaacattgccaacagcttcgtggtggtgagcgagg
atgtagaactggagccccacccggccagcagcggtggccacggggaggaatcggttgtgccggaagcgcaaagcg
tgctgcatctcgaatcggccaacgtgcttccctcgctcgtgcacatttcgctcacgcccgaggagcaccacatca
aggcggaaacggccgagctggtgtacaccaacgataccgatgcgcagggcgtggtaaagataacgatcgtgtcgg
aggaagaggacttttccggcgattctaccacggacacagcgaccgtacgggaggaagatgacgacgccgtcacta
cggaggaaaccactaccggggaggaggatgagtttacgacgctagagccacacagcagctccagcagtagcgcga
cgaccgttggatccactgcgccaccggaaccgatcctgaccgtgctcggtgcggatgaagtggacaaggacaggg
ag
 
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2175
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2700
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3150
3225
3300
3375
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3600
3675
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4125
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4275
4350
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4800
4875
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5175
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5325
5400
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5700
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6150
6225
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6375
6450
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6600
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6825
6900
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7125
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7275
7350
7425
7500
7575
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7725
7800
7875
7950
8025
8100
8175
8250
8325
8400
8475
8550
8625
8700
8775
8850
8925
9000
9075
9150
9225
9300
9375
9450
9525
9600
9675
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9825
9900
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10050
10125
10200
10275
10350
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10500
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10800
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11175
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13875
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14475
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16125
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16275
16350
16425
16500
16575
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16725
16800
16875
16950
17025
17100



Enhanced BLAT Score Card

 (Back to Top)





 Mosquito EvoPrinterHD  -  Generate EvoPrint and EvoDifferences Profile



  


 Gene Name: AGAP006601
        

     Reference Genome: Anopheles gambiae
    		





 Click on individual Species and Composite eBLATs to
view eBLAT alignments.




  

    
      Score
    
     =  
    
    
      Total number of aligning bases.
    
  

  

   
     Start/End
   
    =  
   
   
     First and last aligning bases in reference sequence.
   
  

  

    
      Ns
    
     =  
    
    
      # of Sequence gap(s).
    
  




 
View test species eBLAT to identify gap(s).











  

    
      R/D
    
     =  
    
    
       Sequence rearrangements and/or duplications.
    
  

  

    
        R
    
    
      =  
    
    
      Total # of aligning bases unique to the 2nd or 3rd eBLAT
    
  

  

    
        D
    
    
      =  
    
    
      Total # of common aligning bases
    
  

  

    
      Red
    
    
      =  
    
    
       Common to 1st, 2nd  and 3rd eBLATs
    
  

  

    
      Brown
    
    
      =  
    
    
      Common to the 1st and 2nd eBLATs
    
  

  

    
      Magenta
    
    
      =  
    
    
      Common to the 1st and 3rd eBLATs
    
  









 

    

        
 
            
              agambiae
              (Ref  Sequence)

        
 
             Score
             Start
             End
             Ns
             R/D
        

  

           
            9660
            1
            96600299 

  

           
            398
            4430
            56731
                 0 /
                 99
               

  

           
            310
            5348
            56750
                 0 /
                 11
               


 
               
               
                 All Alignments
               
                 1st
               
                 None
               
           

   


    		
    

        
 
            
              cpipiens

        
 
             Score
             Start
             End
             Ns
             R/D
        

  

           
            1604
            3144
            73730 

  

           
            126
            1961
            44880
                 126 /
                 0
               

  

           
            96
            1197
            54790
                 96 /
                 0
               


 
               
               
                 All Alignments
               
                 1st
               
                 None
               
           

   


    		
    

        
 
            
              aaegypti

        
 
             Score
             Start
             End
             Ns
             R/D
        

  

           
            1352
            3108
            74281298 

  

           
            1245
            3454
            74281
                 19 /
                 926
               

  

           
            312
            3884
            42611
                 1 /
                 11
               


 
               
               
                 All Alignments
               
                 1st
               
                 None