Drosophila EvoPrinterHD - EvoPrint and EvoDifferences Profile

Conserved Sequence Parsing Instructions
To curate selected conserved sequences in both forward and reverse orientations:

1. Enter a short three to four character name to identify the origin of the sequences.

2. Using your cursor, highlight region of interest in the EvoPrint or EvoDifferences profile.

3. Select the "Extract CSBs" button

Conserved Sequence Block Name:
EvoPrint
Evodifferences Profile
Enhanced BLAT Score Card


  
    
	
	  D.melanogaster ash1 Genomic EvoPrint
    (Back to Top)
	
    
  
  
      Black capital letters represent bases in the D.melanogaster ash1 reference sequence that are conserved in the D.simulans, D.sechellia, D.erecta, D.yakuba, D.ananassae, D.pseudoobscura, D.mojavensis, D.grimshawi  and D.virilis orthologous DNAs.


    Reference genome repeat sequences: Blue underlining indicates single-copy repeats and Red underlining identifies multi-copy repeats.
    
(ORF orientation in 3' --> 5' direction)


 agcaaacacatttaaggggggattattattttaatcccaaaaaaaaatgcagaaaaactctaagcaaatgaattt
ttgcgatacaagaacaaagtgattcataatcttaaattcgaagtcccccgaatcagaaacttcactacgcccatg
caagcagtgttgaataacgcgacagttaggcaatccaacacttgtgttaaacaggcggttcatttaaaattcggc
tttgaTTAATaAAAATatAtTtttTATTTcacTTTTAAaaTTtttgttagcagttaataacaattggaaaataac
taaaaactaatagcgcaataagttgtcctactcgggtgttacataatTAagCAgccATAACAtAATAcAATAATT
TAAAATAACAATgcaaaagtcAAACGCcttcaattgcaaagacgagagggggatagttttgTAAAACAAaattAA
TatggagagccaatataaacaaTTAAAAaCAaAAGaaattcatctaaattgggggcttggtgcggtggcgtaagc
actagtatttaaataaatccttatattaaccataattcataatctgttccatcctagccgggaccggagtccttT
CacGAAgtTTGTTCATAACAatgTAcacttTAGgATTACTACTATCACCGttacatctTACAtggctaaatgcta
attgttaattgaagttccataaATATTAatCaatgcctctaactttaggcgtatatacacggcttaatctactcg
cgttacatcggttatgttgagttggccgtagaactgctactggactgctgggtcttccgctgccgggcgccgcgt
ccggacagcaggtatgacaagtcaatgggttgctcctgtgccgtttgtgcatccagacacttaagcttcatagtt
atcaaaacgttctctaaacgcgatttcctcttcttaagcatctttagggagattgaaaacaaagttaattgtaat
agattgatttcaaaacttgttcaaaactctgcacacctgtttattgggcgccacgggtgttacgacatggacagc
agttgcatccgctggggcactgatcccacgaggctttcgcccaaccatcttggcctgatgctgttcctgcctgcc
agacaccttgtgcatcgttgttggcccgGcTcCTAcgTCTAatTCAGTCTTtTGCtTCcttGtcTTcAgCAacGA
cGGaTCcACATCaTGgGGCTacacattaatgctcattagttaactggcgttattattatttaaaatatTaaaCTt
ACCGCATAGCTcTTggAgATCTTaatcttcTCgGGaAAtTTtCtgAAgGCATAgCTcTTgGTgCAgGCtGGaTGg
ttggccttggcctttgagaagaaccttgccgtcTTGTCCACaCGCAgcTCgCAgATgtAgCAATGATCCTCaTCG
ttgCAtTCCATGGggcgtCCTTtacagaaagttgttCGATCcAacACCCAgCAgCGtCCAATgaccaactcaatg
ggtaccacctcataaagtgaaactcgtaccACcTCaTTGGggTAgAAaCGaCGCGAtggttcgTGgAAaGTtTCa
TGaggacgcaggaaatggtgtccgaatataaaacgctttcccagttcgtTtTTCcaCAaGTGcTCcACcCGaAag
ATaTCgCAcTCtTGgTAaTCaATgGCtCCgatcgtttcataggtgtgcttcttcgtcggtaacaccttgccggac
tcaTCcTTgatggGgATgTCtCGtAggACaTAgACgGCaTCgCCCTgtcgtACCTGcAGaTcaCCaCGCATtAgg
GagAGatAgTAaCGgTGtCCcTCtTCgGTaaatTCcTCcAggGgaattTCtCgaTCcACtTccCttGgctcgcaa
cGcTCgCAcTGaTAaTTaTCcGCATcgATGTCaGCtTTgGTaCAtTCaGTaTGcTGCCAcACCATGCAtTTGGag
CACTGAATCATcAagCCtTCaTCtTTGTAcAatCCaCAaatacatcggattacatcctcatcaggagaggcctca
ataggaagcaggggtggcggagtcactttcaatggcacaattggggaatctctttcctttgctcctggtgatttc
ttcactgctatctttccaggttcctcctctgacgaaagcacttcctttggtttaaagctctgcaacgattccgaa
tcaccaagaatctccaccagctgaacatagctggcgatcttctgttgctcatagctatccttcagggacTGcAgc
GctttttcCTTGcCCTCaTCaTCGCcgTGttgcTGcttgGCcTCcacaAAgAGctGctGCATgTGgtcatcgaat
tcctgcggcGttTtgTAaTGtCCcTGcTCcACctgggcttgtatcgatctgaattccacttttgaagttgcagct
gtagaacccaattttccactcaaagtggtctttataggCTTCTTtTTcTTGCTGgacactgtcgtcaacaaatcg
gacattttgagggtctccatggcactgcaaatatcccttagaactacagccattttggccattttctctagttcg
ggatcatgcactgcctgtgtgagtccacgggtttttatgttgcgaggcgagcagagcgcggaaatctgcgctgcc
aaggaaggagaagatggtgtggagggacgtctaccaggaatgtccccattagtggtgccaagtgctggcgaggat
gcagtcgccgctgcatctgacgcccgcttggccttgcatctgcgtatctaatgaaagataaataaatatttttta
atatatatttcgtatattaaaataagtaaaccaaccttttcgaagttcctgactagaaatgtgttgaattgtctg
accagtttcttttctttttcggacaatggttgaagctttgccaccgccactgctgatgaaatatcttttcccgcc
tgccgttgagcatgctttttggccttctgcttccgttggcgcccgtttcggccagaaagtccctctccagatggc
ttggcctccacagcaggaaggggtttaactctctgcgacttgccaccaatgacaccacgacactggggcgtgttg
cacctgcagGGcTGaCCCTCtgagGGaTtgaacAGcGAaAAgTTGTAaTCGTAtgtcagctcctccccctcctct
ATgGctCttTTGGCgaataaaACCATtCtagataggccgttaACaCTCcAttTTTGCATCTCgCAaTTGGGtTCg
CAaGAaTGgTTgACaAAcctaCAaTCGCTgCCCATcCGcTGaCCgTCgATaaccagtCCtCCaTCCAaatgtAag
CAaTAGTGgTGgGTgTCatTtAGgTAgATGcTgGCCATcCtcTGCTTgAAttccttttccgtgactACCTCgCCc
ACgTACTCcAGaATgTAGGTtCCCTTcGCaATGGgtagcttaGTtCgcACtCCCCAtCCtTtatctgccGTCATa
AagCGcTCcACtCCGGgtgcgacggcaTGtCGctggatcttctgatttcggcacttctctccagccgggcaaTTg
cTGGGcgagcacTCcGTaTAaACCATgCGgTTgAGaCAgttgtccaaacaagacttctcgccctggttcttacag
ttaCAggTGGGaTGaTCgAAtcccGCcaaatTtGGACGCACtgactctGCgTAtacattggtgcggatctttcgg
TAaTTCCAggatGGcACaacgtttcgagtgggtaatttggaattagtgtaaGCCCACCAaATgTCgTAaGGtAgc
TCaAAGTCcatttcagtccttcggaggtacttttcgcaatagggaggtggtggtagaaggctcgcaggacccact
tgctcctccaggcctggttttttgttcacctttgctgggggcggcatcagggattgtttgtaatgattcgagaag
agtcctgctacaagataggtcttcttgaccttagatagtttccgcaaggatgtggttgatgccttgtcctcgctg
gattcactgcaactggcatagtcctgcggaccggggttgtgggactcactggcaggcaagggatcgtgctcggta
ggaatactgtctagccgtttagcctctgcttctgcatctatttcttcttgactgacgggaatttctggtggaatc
tcttccaccgtcactggctggactggcttctccttttttggttgggttccagcctctaagttctttcgccgcttc
aagcgaatcttgcagctgaaattcgtattgggatcgatgccatctggtagtctaatatttggttccattttgttt
tttttctgttgaggaggtggtgtgggtggtggctcttccagtaccggctgcttgggttgccggccacgttttttg
gctggccttatctcaggttccgatttgggcggcggttgaggtgcagcttcagcttgttccctgttcttaggtttt
ctacctcgcggtcttcctctagctggtgtttgaggacgctgtaggcgctccagggccaccaccgataatcgaggg
gctttttgattggtcctggccacaaaggtttctctggcctcgcctgcttggggaactcgctcgcaatccagtgga
ggattaggtgccgcctgcacattgacattattgctactcctggtctctcttagggattgcagtggctcatcatcg
ggatcaaactccggctcgtgctcatcaatcacggctgttgtttgctgctccacgctaactttacgtttcttcctg
cgaacagtgggaaatccagttcgatttatctttttccgcttgcgtttcagaagaagattgcctcccgttttgtgt
agcaaggtttcgacaacgcgctggccaacctcctttttcgtatcctccttaatgtccaatgctgagagcagtgga
gattcgacctctgctttggttatgacggattcgttcagtttactaagaggaATtTGgATtTCCAGcTCcACagat
ggctcgaacacaccggggggaggatagctaccagctggggattgaagctgaacgaggtccttcgctgccgacacc
ttctgtttagctgctcctcctctcctctgctgtttgagggaacacaaggaactaggacttatatccagcaacttt
ccaccacttatggaattattatcgacaacaattctcaggggagaattactggccgacgagccagctccgctcaca
gacgtaggttgctctaggagatgtctttttttgggcgttagcgcagattttacgctcctagcattaaactgggct
tgcgatttggtagacgcagtgctcttagcagccgccgcggctgcagcccaggcctctgcgttcaatttcccattg
gcgaatgctacttccgccggcggacgctctcctggagtcaaaagatagtggcgctttttcaacggcaacttgtga
tcatcgggactggaactgtcattgctttgagatttcttgtgtcgtcgtttggtatttccattactgcttccgctg
ccattgggagttccactagcgctagctgatagcatagcgaagtccactaggggctcactcagctttctcttcttt
aggccccgttttaatggtttggaaagggtggaagctggtcctcctccattcagagtcaactgctgggcagggctt
ggtgctgctagggtgGCCTGCAgCTTGtTgGCaTCGGCcAatAGCTTCTCtTTGCCaCTGCTtcCggTcaaaCGa
TCaTCtTGgATgCGaCAcCttgagttgAAgGTgCTtGtgATtaTcTcgATtTCgGTgAGCAGCTTgGAaTCaATG
TTcAatGAtttgttgTGaCTgAaaCTcTTccggCGatgtctgcgacgcattctagaCACCccagacACatAgCTG
CTGCACATactggctgccgatgaGCGgCgagatttaaTcTTGcaggacgatttgctgggagccggggtttcttta
cgctggttcatcattttactaatgaagttatccgggttggtggcagacaaactaccgcctcgaccgaaatactgc
ccggtggtcacatagCGaTTgATtTCgCCgTAcTTcTTGCTgGCACTtgtcgtgggaaggcttttaaggctcggc
ttactgatgtattcgttgctctcctcactgctctggcccagagataatccagctagctgaaggatgtcctggtcc
tcgacagtatcgtctgctgagctcttcaagagcatggaagcccggcgcttccgcctcatccttaggcctgacttt
ccagatTCCTTgCAatcactcCGgTAGCCgCAgCTcTTtgccctgctcctGCGaCtcatacaactcttggTgCTg
TAtCGaCTcTTGCAgCTGGCaTCgGAcTTGTAaCCGgAgTTgTGgTTGTGgctgctccgctgatgtcgtacgctt
ccgtaatccgagacgtaaccgctcttagcggccaagaccttactgcaaatagtggtgcttgctcctgttccacta
gccgcacccacactcatactcctcagcctaaacttcttgttcacgtcgatctctcgccacagcggatcaagctga
agttcctctttgttggatgaactgcaggctgtctttttattgttctgccgtcgcttactcctgggcggtggatag
agcacccgctcagtggcatacattcgcttgtccagatacgccatgtcgatcttaggcttgctgctggaggcgatt
ggcagcgatcccgtcggcacagcattctcattttgcattttcggggagggagtagtgctctgcgttgtgctagtg
gtgcttatcacacccgaatcggcagattcgtttatagcagggccagagtttcctggggcaggaactgtgggaacc
acttttttgggtctacctctgcgctttcgaggaacagctgtttggactagggtctcctccttagctttagccact
ttctcctccgcaagcttcgcattgacggtctgccccagcatctgagtcttctccatgaagtcttgcagcaaagtt
gactggtactggggtaggttcttgtccttggccgctttgcggaaacttccttccacagttgtgtcctccgtatcg
ctctccactcgcttgatagccgcctgcaccaggttaggtaactcgttgtcgctggacgagattccgatatcgagg
gtgggtttgctggccgactgtgccgcctggatgatagcacttagcagcactcgcggagctctctgctgatgcacc
ttcaagggcagatcgtcctctgagtccgaggaaaatgccgagatctgtgacttcttagacttagacactttgtcc
gatttactaatcccactggaacttgccagcttcttgcgcttgaccttcactttcttgctgaccgctctatttttg
gcctccgagcagccggactcggtgtcctgggtagacatttttctggactttgggggtttcttggttgctacgact
cctaacgtggggcggATgGCcGAgATTcTCATtCGcAGtCCATCggTgTCCGAACGcTGcACGctaaActgggtg
gctgacttgatcGACTTCGAcTGgCTcGAtTGATCCGTAATgGAaTCgGTTTCCTgaggagaacaacacacttta
catatagcattgcataaagggtgccattttaaagacttgCCTCATTTTCACTGCCGGAtTCTTGTgcgcgttgcG
tTTCcAgaACCTTTGCTGcTGCcgtCTCATTTTGGCtACaGCTCATATTTtggagtcgctggggagctgcaaagg
ttcgcttttgttagccaagtgtttttaattcgatttggtggcactcttaatcgcctTTaAagTAGGTCAaaccgc
ggtgacatcgtcCAAAAaaaaaaccattacctacagcaCACTTACGcttgattgttttctgggctagtagtagac
ctcagtagtcggtttcgtttgtgccgaaatgacaatctattgctgcacacattgcatttgcacttttcttgagcc
ttaggccgTGGCTTgcctgcTTCTAAAATGGCGCCGTTTTCACtttcccaaaaaCTGCTTTGTTCGAcgcccgac
gacggcgcaacgttgcaacgcttctcgcatgtggcacattaatccgcggtaccgataattcacttttttcgcgac
tagtgggcggtggcggggcgcatcaattgttattgttaatgtggcgcaacaacaaaaagccaggcaaccaaaaat
ttacgaacataaataaagaaaaagactgcgtttcagtgtgcccagctggggtgtacgtgatgtctacgcgacagt
gtgaccttgcggcggaatttagcaggcaactatcgcgaacaatagtggattctattcaaaaatagctggaaaaaa
acaagccgattattgtataacaatgtgaaaccagtaatattaatatgacattttttatgaattaaaaatgaattc
ttatattttttttactattgtaactaaatatttgttatgggaatatattccttacatgaactcgcaaatagcaaa
attttaggtgaccataaaactaatt
  
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ash1 Genomic Evodifferences Profile - Relaxed EvoPrint

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Black capital letters represent bases conserved in all species and colored bases represent sequences present in all species except D.simulans, D.sechellia, D.erecta, D.yakuba, D.ananassae, D.pseudoobscura, D.mojavensis, D.grimshawi or D.virilis.

Reference genome repeat sequences: Blue underlining indicates single-copy repeats and Red underlining identifies multi-copy repeats.

agcaaacacatttaaggggggattattattttaatcccaaaaaaaaatgcagaaaaactctaagcaaatgaattt
ttgcgatacaagaacaaagtgattcataatcttaaattcgaagtcccccgaatcagaaacttcactacgcccatg
caagcagtgttgaataacgcgacagttaggcaatccaacacttgtgttaaacaggcggttcatttaaaattcggc
tttgaTTAATAAAAATATATTTTTTATTTcaCTTTTAAAATTTtTgttagcagtTAATaaCAATTggaaaataac
taaaaactaatagcgcaataagttgtcctactcgggtgttacataatTAAGCAGCcATAACATAATAcAATAATT
TAAAATAACAATGCaaaagtcAAACGCcttcaattgcaaagacgagagggggatagTtttGTAAAACAAAattAA
TAtggAgagccaataTAAACAATTAAAAACAaAAGaAATTcaTCTAAAttgggggcttggtgcggtggcgtaagc
actagtatttaaataaatccttatattaaccataattcataatctgttccatcctagccgggaccggagtccttT
CAcGAAgtTTGTTCATAACAATgTACActtTAGgATTACTACTATCACCGTTacatctTACAtGGCTAaatgcta
attgttaattgaagttccATAaATATTAAtCAATGCCTCTAActttaggcgtatatacacggcttaatctactcg
cgttacatcggttatgttgagttggccgtagaactgctactggactgctgggtcttccgctgcCggGCgCCgCGt
CCGGAcagcaggtatgacaagtcaatgggttgctcctgtgccgtttgtgcatccagacacttaagcttcatagtt
atcaaaacgttctctaaacgcgatttcctcttcttaagcatctttagggagattgaaaacaaagttaattgtaat
agattgatttcaaaacttgttcaaaactctgcacacctgtttattgggcgccacgggtgttacgacatggacagc
agttgcatccgctggggcactgatcccacgaggctttcgcccaaccatcttggcctgatgctgttcctgcctgcc
agacaccttgtgcatcgttgttggcccgGCTCCTAcgTCTAatTCAGTCTTtTGCTTCCTtGTcTTcAgCAacGA
cGGaTCCACATCATGgGGCTacacattaatgctcattagttaactggcgttattattatttaaaaTaTTaaaCTT
ACCGCATAGCTcTTgGAgATCTTaatcttcTCgGGAAAtTTTCtgAAgGCATAGCTCTTgGTGCAgGCtGGATGg
ttggcCTTGGCcTTtGagAAgAAcCttGCcGTcTTGTCCACaCGCAGCTCgCAgATGTAgCAATGATCCTCaTCG
tTGCAtTCCATGGGgcgtCCTTtaCAGAAagttGTtCGATCcAacACCCAGCAgCGtCCAATgACcAacTCaATg
GgtACCACcTCataaagtgaaACtCgtACCACCTCaTTGGGgTAgAAaCGaCGCGAtGGtTCgTGGAAaGTtTCa
TGaGGaCGcAggAAATGgtgtccgaatataaAAcgcTTtcCCagtTCGTTtTTCCACAaGTGcTCcACcCGAAAg
ATATCgCAcTCtTGgTAaTCAATGGCTCCgATcGTtTCaTAgGTgTGcTTCTtcgTcGGtAacACCTTGCCgGaC
TCaTCCTTgATGGGgATgTCtCGtAGgACaTAgACgGCaTCgCCCTGtCGtACCTGcAGaTCaCCaCGCATtAGg
GAgAGATAGTAaCGgTGtCCCTCTTCgGTaaAtTCcTCcAGgGGaaTtTCtCGATCCACTTCcCttGGcTCgCAa
CGCTCGCACTGATAaTTaTCCGCATCgATGTCaGCtTTgGTaCAtTCaGTaTGCTGCCAcACCATGCAtTTGGaG
CACTGAATCATCAagCCtTCaTCtTTGTACAatCCACAaATaCAtCggattacatcctcatcaggagaggcctca
ataggaagcaggggtggcggagtcactttcaatggcacaattggggaatctctttcctttgctcctggtgatttc
ttcactgctatctttccaggttcctcctctgacgaaagcacttcctttggtttaaagctctgcaacgattccgaa
tcaccaagaatctccaccagctgaacatagctggcgatctTctgttgctcatagctatccttcagggacTGcAGc
GCtTtttcCTTGCCCTCaTCaTCGCCgTGttGCTGCttgGCCTCcacaAAgAGCtGCTGCATgTGgtCATCGaat
tcctgcGGcGTtTTgTAaTGtCCCTGcTCCACcTGggCtTGtatcgatctgaattccacttttgaagttgcagct
gtagaacccaattttccactcaaagtggtctttataggCTTCTTTTTCTTGCTGgacactgtcgtcaacaaatcg
gacattttgagggtctccatggcactgcaaatatcccttagaActACaGCCATtTTGGCCATtTTCtctagttcg
ggatcatgcactgcctgtgtgagtccacgggtttttatgttgcgaggcgagcagagcgcggaaatctgcgctgcc
aaggaaggagaagatggtgtggagggacgtctaccaggaatgtccccattagtggtgccaagtgctggcgaggat
gcagtcgccgctgcatctgacgcccgcttggccttgcatctgcgtatctaatgaaagataaataaatatttttta
atatatatttcgtatattaaaataagtaaaccaaccttttcgaagttcctgactagaaatgtgttgaattgtctg
accagtttcttttctttttcggacaatggttgaagctttgccaccgccactgctgatgaaatatcttttcccgcc
tgccgttgagcatgctttttggccttctgcttccgttggcgcccgtttcggccagaaagtccctctccagatggc
ttggcctccacagcaggaaggggtttaactctcTGCGAcTTGCCaCCaATgACACcaCGaCACTGGGgcgtgttG
CAcCtgCAgGGcTGaCCCTCtGAGGGATTGAAcAGCGAaAAgTTGTAATCGTAtGTcAGCTCCTCcCCCTcCTCt
ATGGCtCttTTGGCgAAtaaaACCATtCtaGAtAggCCgttaACaCTCCAttTTTGCATCTCGCAaTTGGGtTCg
CAaGAaTGgTTgACaAAcCtaCAATCGCTGCCCATcCGCTGaCCgTCGATaACcAgtCCtCCaTCCAaaTGtAag
CAaTAGTGgTGgGTgTCaTTtAGgTAgATGCTGGCCATcCtCTGCTTgAAtTCcttttccGTGACtACCTCgCCC
ACgTACTCCAGaATGTAGGTtCCCTTcGCaATGGGtAgcTTaGTtCgCACtCCCCAtCCtTtatctgccGTCATa
AAgCGCTCCACtCCGGgtGCgACggCaTGtCGcTGGATCTTCTGatTtCggCAcTTctctccagccGGGCAATTg
CTGGGCgagCACTCcGTaTAaACCATgCGgTTgAGaCAgTTGTCCaaaCAaGacttctcgccctggttcttacag
ttaCAGgTGGGATGaTCGAAtcccGCCAaatTtGGACGCACtGACTCtGCgTAtACaTTgGTgCGgATcTTtCGg
TAaTTCCAgGAtGGcACaAcgTttCGaGTGGGtAatTTggaaTtagTgTAaGCCCACCAaATgTCgTAaGGtAgC
TCAAAGTCcATttcagtccttcggaggtacttttcgcaatagggaggtggtggtagaaggctcgcaggacccact
tgctcctccaggcctggttttttgttcacctttgctgggggcggcatcagggattgtttgtaatgattcgagaag
agtcctgctacaagataggtcttcttgacCTTagatagtttccgcaaggatgtggttgatgccttgTCCTCGCTG
GatTCaCTgcaaCTGGCaTaGTCctgcggaccggggttgtgggactcactggcaggcaagggatcgtgctcggta
ggaatactgtctagccgtttagcctctgcttctgcatctatttcttcttgactgacgggaatttctggtggaatc
tcttccaccgtcactggctggactggcttctccttttttggttgggttccagcctctaagttctttcgccgcttc
aagcgaatcttgcagctgaaattcgtattgggatcgatgccatctggtagtctaatatttggttccattttgttt
tttttctgttgaggaggtggtgtgggtggtggctcttccagtaccggctgcttgggttgccggccacgttttttg
gctggccttatctcaggttccgatttgggcggcggttgaggtgcagcttcagcttgttccctgttcttaggtttt
ctacctcgcggtcttcctctagctggtgtttgaggacgctgtaggcgctccagggccaccaccgataatcgaggg
gctttttgattggtcctggccacaaaggtttctctggcctcgcctgcttggggaactcgctcgcaatccagtgga
ggattaggtgccgcctgcacattgacattattgctactcctggtctctcttagggattgcagtggctcatcatcg
ggatcaaactccggctcgtgctcatcaatcacggctgttgtttgctgctccacgctaactttacgtttcttcctg
cgaacagtgggaaatccagttcgatttatctttttccgcttgcgtttcagaagaagattgcctcccgttttgtgt
agcaaggtttcgacaacgcgctggccaacctcctttttcgtatcctccttaatgtccaatgctgagagcagtgga
gattcgacctctgctttggttatgacggattcgttcagtttactaagaggaATtTGgATTTCCAGCTCCACaGAt
GGCTCgAAcacaccggggggaggatagctaccagctggggattgaagctgaacgaggtccttcgctgccgacacc
ttctgtttagctgctcctcctctcctctgctgtttgagggaacacaaggaactaGGaCTtATaTCCAGcAaCTTt
CCaCcacttatggaattattatcgacaacaattctcaggggagaattactggccgacgagccagctccgctcaca
gacgtaggttgctctaggagatgtctttttttgggcgttagcgcagattttacgctcctagcattaaactgggct
tgcgatttggtagacgcagtgctcttagcagccgccgcggctgcagcccaggcctctgcgttcaatttcccattg
gcgaatgctacttccgccggcggacgctctcctggagtcaaaagatagtggcgctttttcaacggcaaCTTgTGA
TCaTCGGGaCTggaactgtcatTGCTttgaGAtTTCTTGTGtcgtcgtttggtatttccattactgcttccgctg
ccattgggagttccactagcgctagctgatagcatagcgaagtccactaggggctcactcagctttctcttcttt
aggccccgttttaatggtttggaaagggtggaagctggtcctcctccattcagagtcaactgctgggcagggctt
ggtgctgctaggGTgGCCTGCAGCTTGTTGGCaTCGGCcAatAGCTTCTCtTTGCCaCTGCTtCCgGTcAaaCGA
TCaTCtTGgATgCGaCAcCttgagttgAAgGTGCTtGtgATtATcTCgATtTCgGTgAGCAGCTTGGAaTCaATG
TTCAatGAtTTgttgTGaCTgAAaCTCTTcCgGCGatgtCtgCGACGCAttctagaCACCccaGAcACATAgCTG
CTGCACATaCTgGCtGCCGAtGAGCGgCGagatTTaaTCTTGCaggacgatttgctgggagccggggtttcttta
cgctggttcatcattttactaatgaagttatccgggttggtggcagacaaactaccgcctcgaccgAAaTAcTGc
CcggtGGTcACatAgCGaTTGATtTCgCCgTAcTTCTTGCTgGCACTtgtcgTGggaaggcttttaaggCTcGGc
TTaCTgATgTAtTCgtTgCTCTCcTCaCTGCTCTGgCCcagagataatccagctagctgaaggatgtcctggtcc
tcgacagtatcgtctgctgagctcttcaagagcatggaagcccggcgcttccgcctcatccttaggcctgacttt
ccaGAtTCCTTGCAaTCaCTcCGgTAGCCgCAgCTcTTtGccctgctcctGCGACTCATacaactcttGGTGCTG
TAtCGaCTcTTGCAGCTGGCATCgGAcTTGTAaCCGgAgTTGTGgTTGTGgctgctCCgCtGaTGtCGtACgCTt
CCgtAatccgagACGTAaCCgCTcttagcggccaagaccttaCTGCAAATagtggtgcttgctcctgttccacta
gccgcacccacactcatactcctcagcctaAACTTcTTGTTCACgTCgATcTctCGCCAcaGcGGaTCaagctga
agtTCcTcttTGTTggatgaactgcaggctgtctttttatTGtTCTGccgtCGCTTactcCTgGGCGgtggatag
AgcACcCgCTcagtggcaTACATtCGcTTgTCcAgaTAcGCCATgTCgatcttaggcTTGctgctggaggcgatt
ggcagcgatcccgtcggcacagcattctcatttTGCATtTTcGGGGagggagtagtgctctgcgttgtgctagtg
gtgcttatcacacccgaatcggcagattcgtttatagcagggccagagtttcctggggcaggaactgtgggaacc
acttttttgggtctacctctgcgctttcgaggaacagctgtttggactagggtctcctccttagctttagccact
ttctcctccgcaagcttcgcattgacggtctgccccagcatctgagtcttctccatgaagtcttgcagcaaagtt
gactggtactggggtaggttcttgtccttggccgctttgcggaaacttccttccacagttgtgTCcTCcGtaTCG
CTcTCcACtCGcTTgATaGCcGCctgcaccaggttaggtaactcgttgtcgCTggacGAGAttccgatatcgagg
gtgggtttgctggccgactgtgccgcctggatgatagcacttagCAGcActCGcGGaGCtCtcTGctgaTGcAcC
TTcAagGGCAgatcgtcctctgagtccgaggaaaatgccgagatctgtgacttcttagacttagacactttgtcc
gatttactaatcccactggaacttgccagcTTCTTgCGcttgaccttcactttcttgctgaccgctctatttttg
gcctccgagcagccggactcggtgtcctgggtagacatttttctggactttgggggtttCTTggttgctacgact
cctaacgtGGGGCGgATGGCcGAgATTCTCATtCGCAGtCCATCgGTgTCCGAACGcTGcACGCTaAActgggtg
gctgactTgaTcGACTTCGAcTGgCTCGAtTGATCCGTAATgGAaTCgGTTTCCTGaggagaacaacacacttta
catatagcattgcataaagggtgccattttaaagACTtgCCTCATTTTCACTGCCGGATTCTTGTGcgCGTTGCG
TTTCcAGAACCTTTGCTGCTGCcgtCTCATTTTGGCtACaGCTCATATTTtggagtcgctggggagctgcaaagg
ttcgcttttgttagccaagtgtttttaattcgatttggtggcactcttaatcgccTTTAAAGTAGGTCAaaCCgc
ggtgacatcgtcCAAAAAaAAAaccattacctacagCACACTTACGcttgattgttttctgggctagtagtagac
ctcagtagtcggtttcgtttgtgccgaaatgacaatctattgctgcacaCATTGCATTtgcacttttcttgagcc
ttaggccGTGGCTTgcctgcTTCTAAAATGGCGCCGTTTTCACtttcccaaaaaCTGCTTTGTTCGAcgcccGAC
gacggcgcaacgttgcaacgcttctcgcatgtggcacattaatccgcggtaccgataattcacttttttcgcgac
tagtgggcggtggcggggcgcatcaattgttattgttaatgtggcgcaacaacaaaaagccaggcAACcAAaaat
tTACGAACATAAATAAAGAAAAagactgcgtttcagtgtgcccagctggggtgtacgtgatgtctacgcgacagt
gtgaccttgcggcggaatttagcaggcaactatcgcgaacaatagtggattctattcaaaaatagctggaaaaaa
acaagccgattattgtataacaatgtgaaaccagtaatattaatatgacattttttatgaattaaaaatgaattc
ttatattttttttactattgtaactaaatatttgttatgggaatatattccttacatgaactcgcaaatagcaaa
attttaggtgaccataaaactaatta
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6375
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Enhanced BLAT Score Card

 (Back to Top)


 Drosophila EvoPrinterHD  -  Generate EvoPrint and EvoDifferences Profile


  
 Gene Name: ash1
        

     Reference Genome: D.melanogaster
    



 Click on individual Species and Composite eBLATs to
view eBLAT alignments.



  
    
      Score
    
     =  
    
    
      Total number of aligning bases.
    
  
  
   
     Start/End
   
    =  
   
   
     First and last aligning bases in reference sequence.
   
  
  
    
      Ns
    
     =  
    
    
      # of Sequence gap(s).
    
  


 
View test species eBLAT to identify gap(s).








  
    
      R/D
    
     =  
    
    
       Sequence rearrangements and/or duplications.
    
  
  
    
        R
    
    
      =  
    
    
      Total # of aligning bases unique to the 2^nd or 3^rd eBLAT
    
  
  
    
        D
    
    
      =  
    
    
      Total # of common aligning bases
    
  
  
    
      Red
    
    
      =  
    
    
       Common to 1^st, 2^nd  and 3^rd eBLATs
    
  
  
    
      Brown
    
    
      =  
    
    
      Common to the 1^st and 2^nd eBLATs
    
  
  
    
      Magenta
    
    
      =  
    
    
      Common to the 1^st and 3^rd eBLATs
    
  






 
    
         
            
              D.melanogaster
              (Ref  Sequence)
         
             Score
             Start
             End
             Ns
             R/D
        
  
           
            8501
            1
            8501 0 14 
  
           
            151
            231
            8419 0 
                 0 /
                 137
               
  
           
            113
            39
            2847 0 
                 0 /
                 99
               
 
               
               
                 All Alignments
               
                 1^st
               
                 None
               
           
   


    
    
         
            
              D.simulans
         
             Score
             Start
             End
             Ns
             R/D
        
  
           
            7992
            3
            8500 2 60 
  
           
            547
            3775
            4346 2 
                 5 /
                 479
               
  
           
            186
            356
            8435 12 
                 18 /
                 105
               
 
               
               
                 All Alignments
               
                 1^st
               
                 None
               
           
   


    
    
         
            
              D.sechellia
         
             Score
             Start
             End
             Ns
             R/D
        
  
           
            7980
            1
            8500 0  
  
           
            103
            208
            8419 0 
                 21 /
                 82
               
  
           
            101
            444
            5050 0 
                 4 /
                 97
               
 
               
               
                 All Alignments
               
                 1^st
               
                 None
               
           
   


    
    
         
            
              D.erecta
         
             Score
             Start
             End
             Ns
             R/D
        
  
           
            7580
            131
            8474 0  
  
           
            87
            301
            3383 0 
                 1 /
                 86
               
  
           
            56
            217
            294 0 
                 3 /
                 53
               
 
               
               
                 All Alignments
               
                 1^st
               
                 None
               
           
   


    
  
  
    
         
            
              D.yakuba
         
             Score
             Start
             End
             Ns
             R/D
        
  
           
            7512
            3
            8283 0 68 
  
           
            4266
            91
            8283 2 
                 32 /
                 4166
               
  
           
            139
            225
            3383 0 
                 3 /
                 68
               
 
               
               
                 All Alignments
               
                 1^st
               
                 None
               
           
   


    
    
         
            
              D.ananassae
         
             Score
             Start
             End
             Ns
             R/D
        
  
           
            5160
            140
            8256 0 23 
  
           
            131
            233
            5689 3 
                 13 /
                 91
               
  
           
            123
            212
            8312 0 
                 92 /
                 4
               
 
               
               
                 All Alignments
               
                 1^st
               
                 None
               
           
   


    
    
         
            
              D.pseudoobscura
         
             Score
             Start
             End
             Ns
             R/D
        
  
           
            4343
            232
            8196 0  
  
           
            125
            126
            2987 0 
                 40 /
                 85
               
  
           
            110
            372
            8198 2 
                 43 /
                 67
               
 
               
               
                 All Alignments
               
                 1^st
               
                 None
               
           
   


    
    
         
            
              D.persimilis
         
             Score
             Start
             End
             Ns
             R/D
        
  
           
            4246
            232
            8196 0  
  
           
            86
            238
            6370 0 
                 21 /
                 65
               
  
           
            79
            2494
            2839 0 
                 47 /
                 32
               
 
               
               
                 All Alignments
               
                 1^st
               
                 None
               
           
   


    
  
  
    
         
            
              D.mojavensis
         
             Score
             Start
             End
             Ns
             R/D
        
  
           
            3132
            348
            8197 0  
  
           
            123
            231
            4283 0 
                 91 /
                 32
               
  
           
            75
            4398
            8197 0 
                 38 /
                 37
               
 
               
               
                 All Alignments
               
                 1^st
               
                 None
               
           
   


    
    
         
            
              D.grimshawi
         
             Score
             Start
             End
             Ns
             R/D
        
  
           
            2873
            212
            8197 0  
  
           
            1660
            694
            4946 0 
                 79 /
                 1581
               
  
           
            153
            240
            8432 0 
                 123 /
                 30
               
 
               
               
                 All Alignments
               
                 1^st
               
                 None
               
           
   


    
    
         
            
              D.willistoni
         
             Score
             Start
             End
             Ns
             R/D
        
  
           
            2695
            841
            8205 0  
  
           
            114
            228
            2792 0 
                 114 /
                 0
               
  
           
            116
            4268
            7828 0 
                 73 /
                 43
               
 
               
               
                 All Alignments
               
                 1^st
               
                 None
               
           
   


    
    
         
            
              D.virilis
         
             Score
             Start
             End
             Ns
             R/D
        
  
           
            2676
            348
            8017 0  
  
           
            106
            215
            3390 0 
                 51 /
                 55
               
  
           
            109
            955
            8014 0 
                 60 /
                 49
               
 
               
               
                 All Alignments
               
                 1^st
               
                 None
D.melanogaster ash1 Genomic EvoPrint (Back to Top)
Black capital letters represent bases in the D.melanogaster ash1 reference sequence that are conserved in the D.simulans, D.sechellia, D.erecta, D.yakuba, D.ananassae, D.pseudoobscura, D.mojavensis, D.grimshawi and D.virilis orthologous DNAs. Reference genome repeat sequences: Blue underlining indicates single-copy repeats and Red underlining identifies multi-copy repeats.
Drosophila EvoPrinterHD - EvoPrint and EvoDifferences Profile

D.melanogaster ash1 Genomic EvoPrint (Back to Top)

ash1 Genomic Evodifferences Profile - Relaxed EvoPrint (Back to Top)

Enhanced BLAT Score Card (Back to Top)

Drosophila EvoPrinterHD - Generate EvoPrint and EvoDifferences Profile
