Drosophila EvoPrinterHD - EvoPrint and EvoDifferences Profile

Conserved Sequence Parsing Instructions
To curate selected conserved sequences in both forward and reverse orientations:
1. Enter a short three to four character name to identify the origin of the sequences.
2. Using your cursor, highlight region of interest in the EvoPrint or EvoDifferences profile.
3. Select the "Extract CSBs" button

Conserved Sequence Block Name:
 


D.melanogaster arm Genomic EvoPrint  (Back to Top)

Black capital letters represent bases in the D.melanogaster arm reference sequence that are conserved in the D.erecta, D.ananassae, D.grimshawi and D.willistoni orthologous DNAs.

Reference genome repeat sequences: Blue underlining indicates single-copy repeats and Red underlining identifies multi-copy repeats.

(ORF orientation in 3' --> 5' direction)
tcaagtacttttgaaaactggaaatatcttaaagtaggttcgaacttcgaacttagggctcgttgttccaagccg
tgactctgcggcacccaattgtggagcaaataagaaaaacgccatatgaagggaaatgtacgagTTCTaTTGCAA
ACATTtGTtTAATTTtCCATTTcgtttacgtgggTaATATGTAAtgcatcatataatatgtttttcttgccgttt
cgttcgcattataataaatgtataatattatgcatgtatgcgtgtgtgtatgctttgtcgcggggtatggtgtgt
gagcaaatagccttctcccacggacttcagttctggaagcagaactttgacctgccgcagctcctcgtatttgtc
aagtaaaatccacaccttcgttgatctagtcaagtttcggtgatcgcgattccgggatccgggatggaatcaaag
ccggtggaagagggctattgtgcagggatgggaattcgtgtgttttatgttatggggtcgaatggatactcgacc
cttacccttagctcggcttgtcTAaCAaTCgGTATCGTACCAGGCAGCCAggTTgTTGTTGTCaTTgGGtGGCGT
cGGCATGGcgTCCAAgTCaAAGTTcAAtgcaCCgGCATCaATcTCgCCaACgTCCATGTCCATgGAaTAGGgcGA
aGTtGGTGCgccgctaggcggaatggcgccgatgttACCACCGCCGCCGCtagctCCGCCtacagctccaccatt
gccgggagcaCCGCcagCACCGCCGCCGCCcACtGGgCTGCTGATCTCcAGACCCTGCATcGAATCTATTGGTAg
AGTATCATATCCTGtGAAcaaacgagatgggcaaagaatgatagggaatattgtgattagtggagaggatttaca
atctccgccagccgtcaactggcagatggtgcgacaccttgaagtcctgcaaaagtggattcactgctgctcgct
ttaatcgggaactcatctaaaatgcatctttccaacacacttattggatttatgccgattcaaacgaaatgcaga
ctccactcgtacacgacgaccctttaacattaacctagagtatcaaacaacaaaaatctgtcgttgaatactgct
taaaaagaactaaatacgtctaaaatacgacacgacatggacgcgttattgtcgattggaattcgtcctctgaaa
cttgcatgcacacacggcttacaaactagatacgagtatatacaccataaaatatatggattgtgggtggctaaa
actatgcgattatcgcaggctacgtgacatgcagtatgaaccgaaataaagtttattactgctccttcatggagg
gagaccttaaagataaaagccgtctaatgaaaggaaacaaaatagatttatacaaaacaataaatttgcgaaatt
atcaaagaaacgtatgtgtttctttactattcacgatccttattttttaaggttgcactctgtggttatttgtgg
tagatcggtgttcgtgtgtgtgtgtagtgcaaaaatcttcaagctacgtgtaaagtccggagagatagatattct
tttccaaatgtgagagagcaggggaagtaatcccgcaaaagactgaagtttatccctattatcccttattgacat
aattggcgcccaatgtcgggcatcggatgcacaagatttggatttatcgacaaatgtttgtataccgcaaatgga
aacaggcggagttatattcacttccttcgcatgcagccgtggaactcaagggtttaacgatattagggggtaacg
agcaaggagacagagatattgagatcaagcgagggaactgggtggaagagggtttcgctcacactgaagaaacta
aagtgagcttaacgtcttagtttcgattaacaagtgcatatttgaatgatgaacagacatgataacgattaaatg
gatgcgggggtttggggctggtcccgaggatttttcgaattgtctgaacctgttaacgtttccgttggtttactt
tttagtggggttatgcaggattcttcttcttggggtgtggctcgaggggtacgatgggtacgagggtctcttctt
acgcatatgacaTACATACCTTGCTGaTGGAATGCGCGACCTCCGTGtGAACTGTGCACgCTGGGCGGACCtTGT
CCgTAcAGGCCCTCATATGCTTCtTCtGgTCCAAGCATATCCTGtgatcgatcgaattcgtgtttgtttatcggt
ttatcggtcggtttgcgtgatatgtgcgtgatcgtacgtgtgtggttgtgtggtggatgtattttttacagtttc
gttttcatttatTTtTTgTTgggATGGATcAGAAgTgAAAaGTTGTTAGGAaAGAagaagACACgcgcaaacgcc
agtttgcaagtgaatgtgagcgagaggaatagagagtggggtgaggttgttgtggtatcggggcggcgagagcga
gacagagagtgagagtcgcattgttggattgttgttgttggtgagattttggtgcagtgattatccgtcatttcg
gttgttgttgcgtttcatttaccgttgcagttgtgtttatagtgatttGTTGtTttgttttgggttgttttggtt
ttacacacacaaagtaaacataaaggaAAAaAAGAAAAgaacaaaagtaaaacaaacgtgaattaattacaaaat
caaaattaaacataaacaaagagcgcgatgacgcagcaattatacaaattgaaattcatgtaagtatgtttttgg
tcgggttgttttcggaggaatcgtggagggggtgaggttgggttgtgtggtttggggagggtatcaatcaaatat
gatcagaactaatcggaatccgtatttgtaatcggcgttcatctacaactacctacttatcgactaacatatacg
gtctatcgattggtggtttacaagaaaagcaaaaaaccgaacgaaatgaacccaaatgaaatggaaattcaaaaa
taggttatcgaaatcgtaagcaagcgatatataggtcgatacttaatctggataccattatataatgcttgacta
aagtaggttctctacaaatttacaattttatgtacagatttcgcttaacgcgctgcatttttaaatcagattcaa
tggaacacaagaagggcgtttaaaaagccggaatcccggggacgtcgaatttgcttagcctacttagcACGCACC
TGtAgaTCgGGACCCATGCCcAggTCgGCaTTGGcCCAtATGTTGTTgTCcTCGCGcAgCAGcGAgTTGGTCAgC
TCtATgGAtAgcCGCTTcTTgTAaTCCTGcGGcTTgTCCTCaCTCATgCGaaagaGaACaGCgGCggcgtatGTg
GCcACgCCtTCaTTGCGcGAgTGCAggAGATCgGTcAgcGGCCCAGTgGCGCCcTCCTGcTCgATaATcTCgGCG
CCCTCCTTgTCaGCggcgagctcacaaAGaACGCCAGCAGCcACGCGCtaaagtaagaaaatattcatagtatac
ttgagtcacaacaagataaacttcgatctcACCTGtATgTTcTCgATTTCGTTGAAcAGcAAtCGtACaAAgATC
GGTATtACCGAcTGcTGGCGaATgAGtGCcCggTTgTGaGAcTCgCGggCcAggATaTGtAgcgcccccaccgtg
CCcTCgACAATcTCCTCCATgCGaACgccgtcagcgtatGCgGAcGGCTGCTGtgaaccagtggtggctatcgag
gaacgttgctgcaaggttgcaagtataattgacgtcataattattctctccaacttatgcttccactataactaa
ctcaccctcTCTGTGTCtTGGAAgGCgCGCATaAgCagtCGcACCAGATGgtggatggccccgTGcTCcCGCAAc
GGgGCgTGATTGGCCGGACAGAGgGCCAaATTgCGtATgAGtCCaATgACgGCCTTGATcAaGGGCCAgCGtGAt
GGtGGATGcAatAGCTTtACAATcACcGAtAgtCCgTAgTTtAagCGtACgGCaTTcTGGGCcAacTCaGAGTCc
ACaTGACGcGAggtcaagTGaCGcAggGCaCAtACaGCCGGCTCGGTaATCTCtTCgCGaTCtCCaGCATTGATa
ATaGTaCggacgAGgGCgTCcACaCCgCCCACcTGacaaacggtggccttGTTgCgcTGaTTGTTgCAcGTCAgA
TTtgaaaggATacCgGCggCAcagGTgACcacgttGACATcggtcgagcccagaaccTGGACgAGaGATTGgAGc
AaaGCtTCaAggCCCTCCACCTTaGTGGCtGCATCCGAaAGaTTgCGgAgcGTCCAcaaacagTTtTGcACaAGg
CGcGGtGACATgTTaCCCAagTGCATaGCCAgcGCCTGCATtCCaCCGGCATCcACgATgGCCGGCTTgTTgCTg
GAgCAaACgGAgAGcACtTTCAGtACcCGcGAaGTGGTCCAcAgaAGCTTCTCGTAGTCgTAgGAgCGCATaATG
CGcACgAgTTCgTTgGGCCctCCgGAGGCaAGaATtATtAacTTgCTCTCcTGgTTaCCaTAgGCCAGaATttgc
aaGCAaTCtGTGACgATaGCCAgaAACTTaACgTTgtTtCgtTGCAGcAGaGTaACCATCTTcTGAAGCCcgccg
gccaggcgcacagccatcttagagCCaTCCTGgTggagcaGCAaaTTgTGcAGaGTGGTaATtGCATAGAAcAgc
ACACTcTccactggcgaggagagcAactTgacgagtgccgGgATgCCGCCaCTCTTgAAGATGGCCAgcagacCC
TGgCGATGgtgtgatAAgTTGTGCAGtGttcctACcGCtGCCTTGGTgCTCTCCAGATCgTTgCTgTTaGAgATG
GCacgcacCAAaGCGGCtACCATCTGaGGGCTgTTCATaATGGCaTGtCGcGAgGCcTCCTTCTTaGAcAgcTGg
TGgACCATCATgGCgGCCTGgGAaACtACCACCTGATCCTCaTCgTTcAGcAGcTTgATcAaCTCgGGtATGGCc
ctggttgccagctcagcgtcgtcctggtagttgatcagattgaccaccgcgtgctttagcatttgtgacggttcc
gaaagacgttgcaCtGCcGTCGGcTGttggGGATCaAactgggtgGAgGGaATCTCaATGCCCTCCTCcagggtt
tccggaAACATGGCaGCaCGtACaCGtTGgGAgCgtGTCTGGCTcaGtTGCTGgTTCATaTCgTCCACtTGgTCt
TGtGTgAAATTCTGcgGgAAACCgGTgTCCAggTCgAACATaAgtGGAtctcCCTCCATcTCcTCgTCCTCcTTG
CCaGAcAGCGATGGaACCTGGGTcACGGCaCCCGAgTGgATgCCgGAGTCgCCCAagtacgaattcTGCTGCCAC
ATgAGgGTCTGCTCCTTgGCgGAtACCATcGGCGGcAgATCaGGtGGATtgTATTGaTTattatgcgacactgca
aaagattgattgcaaaacgttttagagtgaattgacaaaaatatacactccaacttttctaactcgaatcaccga
tgtgtttcgatcatttccattgcaacttaatcgtgttataagaccccaaagaagcagaaatgaagtgtaagaata
atttttgtatgctcttctttaacttgttaacatctgtctacacattcatggtaacttttcttttttaaaaccttt
tgaagtggaaaaacgacagagtagaacggaatactgagtgcagcccaccatctacatataatgcaacgaattcgg
gtgcggggatgcacacgctttaaccctctgcaacccatttgcatgcgctttcgttaaaagatggccaaatgggaa
acgacagcgactgacagcaaagtgagcagcatcccaacagccggcgcaaaaaatgcaaaaggaaaactttgaagc
gtgacaaattgaacgctgcaggatattcccagaaagttcagggcgctgggcggaatgggtttggtgcagggggtc
agatgctcacacatgagagggtactggcaaaaggatttgtgggcgttttgtttgccacttcagtcttaattatgc
cgttccaggcccagctttttgcctttgttgttttacttatgcgcggacacagcacggccacgccccttctgtatg
cattcgtaattacaaacttcactgctcttcgccatccactctgcaatactacagtcaaatctcaatagatcgaac
acggtgctgaatataaatgactccataaaaagcagcattgaaacatgctggtaacctatggaccaggtctccaaa
tgtggtctctgagttcaacaaaatggtttagcccacagctgatgaattttgttcgctataagcacatgcgactgt
aatactgtaatcgcttttcgtttcatttcccaaatcgattaagcgttttttcttcgccatatccgtcgagtgggc
cacgcacttgaatggagtactgtgttgggatggagggcgcgggcggagcctttaattgcatgttgccgcttacta
attaaattctgcacagcagcagcgccagaaaaaagcaaaggcagaagccaagaaaaatgtgcagccaactcgact
gcgagttcgggagacggggtacgagaacaaggtccccggagaagaccaaggagcgatggcaaaagggtggcgtgg
gttggagtgccacgtgcaagtacacgagtccttgaatgtgtgtgtgcgtaagtggatagcatggggagggaatgg
agtttcaaaggatagtgagcagcggcctactcaagggggtttcggggttgtacagcaattagttgaaaactaaac
taaatacttaatagtggtcgaattaaaaggccacttcctaaatggctatgaactgttcactactgtcgtcctaga
tattgacattcctcgactttctgtggcaaaagtgatgggagttcaatgaagccaacatgcattaacgagctcctc
ccctttggtgaagtcctctcctgcgcctctgagagcctcaccaacgcgctctgcaaatcaagtgtcaaaaagaaa
tcttctttcctactccgtttactgcgtcagcggaaaagtgtaaatttcaaactccgaagtagaagggagcgcttt
tttttttgatgaatcggatataagcacaggccgctggtggttgatggcccaacaaaaaaaagatcatcaagcatt
acaagtatgtagatgtacacaaattatttgtctggggtggatggatatagttgttaccctgtattctgcagacaa
cccacaaagggaatatcagaaacaaatgacaaaagcaaatactttatgtcaaatttgccaaatttgtcaaaaaca
agcatcgctccctcatttaacgttggagaggggttgttattgtattgcgatacggggataattgtttcacagata
caatgcgctgttgcatccccttcatagggccatgtattctgactatttatcctaaatgttctaaactctagagct
accatgacttaattgcgtccattgaaacgcaatatcatctctaatttgatgaaatcggatcctgtatacaactgc
atttggactgggtatacaaaagcccaaagtggaacactctgatacacagttaactttgatgctctttgcatactc
cctggaagatgggaaagggaagagtaccgctgctggaaatACTTACTgGTtCGaTTcTGGGCTGGCATGTAACTC
ATCTTGGTGatTgaGGCGcTTTACACCACACCTgcaagaaagagacggagagtatatgagtaatgtgctggacag
tcaataacatggagttcgtgtgtgcttcggatggagaccacggaactccactaaatgggggccccggaaagaagg
gcttgttgtgtttgcagactgccaacagacgcagatatcgtccgttagtcacttattctagtcgttggtcttttt
ttttaactcatttccgctttgagatgccgaagcataatatgaaatatgctgcgtatacaaacaaacgcactaata
cattcttacgcaggtagaacgggtatttgtgggtatgtgtgtgtctacctgccgaagactttggccacgaacctt
gagttatttaattactttgtttagcactctttcaaatctcatgcactccaacaaaaaacaaaatggatttttcac
ttctctcgaaaaaggcgcagcggaaaatgcgaccgaccagcacgctcgtttaaacggaacagaatccagatgcgg
agagcgcaagcaaagcaaggcacttgcaacaccgcgcgtgcggagtgcgggaaagggacagggaaagagactggg
agagaaagtaaagggccgcggcagtgcagcatacaaatgcagtgctgcgcagagttgccacacatccaaacgatt
gtgcctacacacacatactcgcgtaggcagctcagaaagaatcccaactccatttcagttgtcgattagataaaa
cacctaacgataagcctgcctctagattcgaagaaaacgatttcctgtctgtggcattgtttacattccagcgag
caacaaaacaagcgcccgatttacgggggaggaatacataaaaatgccgtttgtgtgtatccagatcatacacac
acacatacacaggcgcacatccagcgaacccctgcccacccccgcgccgacttgtttgccatggctttccaactt
tcatggcacacagaaactttggctttccaaacggattcactaccgactaacagtactcaccgcgtccaaggaatt
taagtctgctttagagcaggatttatttatttaaaacgctataagaaacaaaataacagcgaattgtctgctcga
gaaaaactgtgtatatggcgacgaaacccaactagcgatggcctgctgctgtcccgataactcgatgggccctgt
gcgataggccaaaggaatttttcaaattttttttgttctgagaacacaaaaatctcacgaaatttgtatagcatt
tcatccttaagaaactcaattcacaatatttataatttagctaaggcgaatttatttctagttcatgttatcatg
ttatctcgaactcaccgtttatcttgtataaacatttaccaacacaagcacctgagtgtacatgagggtgtatga
caacacaggtacgaccaaaaactattgtttttgggcgacgaattaaagaaatatctatgactttactattactta
ccgcttcgaaagtaaatttatctgctcaaaggcaggttaacgcacttttgacgcacttagatatttaaattcgac
aaaaatccccgactatgaaaactgtgtatatgagcgcagaacagataaccgataactcc
 
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arm Genomic Evodifferences Profile - Relaxed EvoPrint  (Back to Top)

Black capital letters represent bases conserved in all species and colored bases represent sequences present in all species except D.erecta, D.ananassae, D.grimshawi or D.willistoni.

Reference genome repeat sequences: Blue underlining indicates single-copy repeats and Red underlining identifies multi-copy repeats.

tcaagtacttttgaaaactggaaatatcttaaagtaggttcgaacttcgaacttagggctcgttgttccaagccg
tgactctgcggcacccaattgtggagcaaataagaaaaacgccatatgaagggaaatgtacgagTTCTATTGCAA
ACATTTGTTTAATTTTCCATTTCgTTtAcgTGGGTAATATGTAATGCaTcATATAATATGTTTTtCTtgccgttt
cgttcgcattataataaatgtataatattatgcatgtatgcgtgtgtgtatgctttgtcgcggggtatggtgtgt
gagcaaatagccttctcccacggacttcagttctggaagcagaactttgacctgccgcagctcctcgtatttgtc
aagtaaaatccacaccttcgttgatctagtcaagtttcggtgatcgcgattccgggatccgggatggaatcaaag
ccggtggaagagggctattgtgcagggatgggaattcgtgtgttttatgttatggggtcgaatggatactcgacc
cttacccttagctcggcttgTCTAACAaTCGGTATCGTACCAGGCAGCCAgGTTgTTGTTGTCATTGGGTGGCGT
CGGCATGGCgTCCAAgTCAAAGTTcAATGCACCgGCATCAATCTCgCCaACgTCCATGTCCATGGAATAGGGCGA
aGTtGGTGCgCCgCtaggcggaatggcgccgaTGtTACCACCGCCGCCGCtagCtCCGCCtacagctccaccatt
GCCGgGAGCACCGCCAGCACCGCCGCCGCCCACtGGGCTGCTGATCTCcAGACCCTGCATCGAATCTATTGGTAG
AGTATCATATCCTGTGAAcaaacGAGAtgggcaaagaatgatagggaatattgtgattagtggagaggatttaca
atctccgccagccgtcaactggcagatggtgcgacaccttgaagtcctgcaaaagtggattcactgctgctcgct
ttaatcgggaactcatctaaaatgcatctttccaacacacttattggatttatgccgattcaaacgaaatgcaga
ctccactcgtacacgacgaccctttaacattaacctagagtatcaaacaacaaaaatctgtcgttgaatactgct
taaaaagaactaaatacgtctaaaatacgacacgacatggacgcgttattgtcgattggaattcgtcctctgaaa
cttgcatgcacacacggcttacaaactagatacgagtatatacaccataaaatatatggattgtgggtggctaaa
actatgcgattatcgcaggctacgtgacatgcagtatgaaccgaaataaagtttattactgctccttcatggagg
gagaccttaaagataaaagccgtctaatgaaaggaaacaaaatagatttatacaaaacaataaatttgcgaaatt
atcaaagaaacgtatgtgtttctttactattcacgatccttattttttaaggttgcactctgtggttatttgtgg
tagatcggtgttcgtgtgtgtgtgtagtgcaaaaatcttcaagctacgtgtaaagtccggagagatagatattct
tttccaaatgtgagagagcaggggaagtaatcccgcaaaagactgaagtttatccctattatcccttattgacat
aattggcgcccaatgtcgggcatcggatgcacaagatttggatttatcgacaaatgtttgtataccgcaaatgga
aacaggcggagttatattcacttccttcgcatgcagccgtggaactcaagggtttaacgatattagggggtaacg
agcaaggagacagagatattgagatcaagcgagggaactgggtggaagagggtttcgctcacactgaagaaacta
aagtgagcttaacgtcttagtttcgattaacaagtgcatatttgaatgatgaacagacatgataacgattaaatg
gatgcgggggtttggggctggtcccgaggatttttcgaattgtctgaacctgttaacgtttccgttggtttactt
tttagtggggttatgcaggattcttcttcttggggtgtggctcgaggggtacgatgggtacgagggtctcttctt
acgcatatgaCATACATACCTTGCTGATGGAATGCGCGACCTCCGTGtGAACTGTGCACgCTGGGCGGACCTTGT
CCGTAcAGGCCCTCATATGCTTCTTCtGGTCCAAGCATATCCTGTGATcgatcgaattcgtgtttgtttatcggt
ttatcggtcggtttgcgtgatatgtgcgtgatcgtacgtgtgtggttgtgtggtggatgtatTTTTTacagTTTc
gTtTTcaTTTaTTTTTTgTTgGGATGGATCAGAAGTGAAAAGTTGTTAGGAAAGAAGAAGACACgCGCAaacgcc
agtttgcaagtgaatgtgagcgagaggaatagagagtggggtgaggttgttgtggtatcggggcggcGAGAGCGA
GAcAGAGAGtGAGAGtcgcattgttggattgttgttgttggtgagattTTGGTGcaGTGattatccgtcATttcg
gttgttgttgcgtttcatttaccGTTGCAGTTGTGTTTatagtgatTTGTTGTTTTGTTTTgggTTGTTTTggTT
TTACACAcacaaagtAAAcatAAAGGAAAAAAAGAAAAGAAcaaaagtaaaacaaacgtgAATTAATTACAAAAT
CAAAAtTAAACAtaaacaaagagcgcgatgacgcagcaattatacaaattgaaattcatgtaagtatgtttttgg
tcgggttgttttcggaggaatcgtggagggggtgaggttgggttgtgtggtttggggagggtatcaatcaaatat
gatcagaactaatcggaatccgtatttgtaatcggcgttcatctacaactacctacttatcgactaacatatacg
gtctatcgattggtggtttacaagaaaagcaaaaaaccgaacGAAAtgaacccaAAtGAAAtGgaaattcaAAAA
taggttatcgaaatcgtaagcaagcgatatataggtcgatacttaatctggataccattatataatgcttgacta
aagtaggttctctacaaatttacaattttatgtacagatttcgcttaacgcgctgcatttttaaatcagattcaa
tggaacacaagaagggcgtttaaaaagccggaatcccggggacgtcgaatttgcttagcctacttagCACGCACC
TGtAGATCgGGACCCATGCCCAGGTCGGCaTTGGCCCAtATGTTGTTGTCCTCGCGCAGCAGCGAgTTGGTCAgC
TCtATGGATAGcCGCTTCTTGTAaTCCTGCGGCTTGTCCTCaCTCATGCGaAAGAGaACaGCGGCGGCgTAtGTG
GCCACGCCtTCaTTGCGCGAgTGCAGgAGATCGGTcAGCGGCCCAGTGGCGCCCTCCTGcTCgATAATcTCGGCG
CCCTCCTTGTCaGCGGCgAGCTCaCAaAGAACGCCAGCAGCCACGCGCTAAagtaagaaaatattcatagtatac
ttgagtcacaacaagataaacttcgatCtCACCTGTATGTTCTCGATTTCGTTGAAcAGCAAtCGtACAAAGATC
GGTATtACCGAcTGcTGGCGaATgAGtGCCCGgTTgTGaGACTCgCGgGCCAGGATATGTAgcGCCccCACCGTG
CCCTCGACAATCTCCTCCATGCGaACgCCGTCaGCgTAtGCgGACGGCTGCTGtGAaCCaGTgGTGGCtATCGAg
GAACGTTGCTgcaaggttgcaagtataattgacgtcataattattctctccaacttatgcttccactataactaA
CTcACCCTcTCTGTGTCtTGGAAGGCgCGCATaAGCAGtCGCACCAGATGgtggATgGCcCCGTGCTCcCGCAAC
GGgGCgTGATTGGCCGGACAGAGGGCCAaATTGCGtATgAGtCCaATGACGGCCTTGATcAaGGGCCAgCGtGAT
GGTGGATGCAatAGCTTtACAATCACcGAtAGtCCGTAgTTtAagCGtACgGCATTCTGGGCCAaCTCaGAGTCc
ACaTGACGcGAgGTcAagTGaCGcAggGCaCAtACaGCCGGCTCGGTaATCTCtTCgCGATCtCCaGCATTGATa
ATaGTACGgACGAGGGCgTCcACaCCGCCCACCTGaCAaACgGTgGCCTTGTTGCGCTGATTGTTGCACGTCAGA
TTtGAaAGgATaCCgGCGGCACAGGTGACCACgTTGACATCgGTcGAgCCCAgaaccTGGACgAGaGATTGGAGC
AaaGCtTCaAGGCCCTCCACCTTaGTGGCtGCATCCGAaAGATTGCGgAgCGTCCACAAACAGTTtTGcACaAGg
CGcGGtGACATGTTaCCCAAgTGCATaGCCAgcGCCTGCATtCCaCCGGCATCcACgATgGCCGGCTTgTTGCTG
GAGCAaACgGAGAGcACtTTCAGtACcCGcGAaGTGGTCCAcAGaAGCTTCTCGTAGTCGTAGGAGCGCATaATG
CGcACgAGTTCgTTGGGCCCtCCGGAGGCaAGaATtATtAacTTGCTCTCCTGgTTaCCATAgGCCAGaATtTGC
AaGCAATCtGTGACgATaGCCAgAAACTTaACGTTGTTtCgtTGCAGCAGaGTaACCATCTTCTGAAGCCcgccg
GCCAggCGcACaGCCATCTTaGAgCCATCCTGgTGGAGCAGCAaATTGTGCAGaGTGGTaATtGCATAGAAcAgC
ACACTCTCCACtGGcGAgGAgAGCAACTTGACgAGtGCCGGgATGCCGCCaCTCTTGAAGATGGCCAgcAGaCCC
TGGCGATGgtgtgatAAgTTGTGCAGtGTtCCtACcGCtGCCTTGGTGCTCTCCAGATCGTTGCTGTTaGAGATG
GCaCGCACCAAaGCGGCtACCATCTGaGGGCTGTTCATaATGGCaTGtCGCGAGGCCTCCTTCTTaGACAGcTGg
TGgACCATCATgGCgGCCTGgGAaACtACCACCTGATCCTCATCGTTcAGCAGCTTGATCAaCTCGGGTATGGCC
CtgGTtGCCAgcTCaGCgTCgTCCTGgTAGTTgATCAgATTgACcACcGCgTGcTTtAgCATtTGtGAcGGtTCC
GAaAgaCGtTGCACtGCcGTCGGCTGtTGgGGATCAAACTGgGTgGAgGGaATCTCaATGCCCTCCTCcAGgGTt
TCcGGaAACATGGCaGCACGtACaCGTTGgGAgCGtGTCTGGCTcAGtTGCTGgTTCATATCGTCCACtTGgTCt
TGTGTGAAATTCTGcGGgAAACCgGTgTCCAggTCgAACATaAGtGGATCtCCCTCCATCTCCTCgTCCTCCTTG
CCaGAcAGCGATGGaACCTGGGTcACGGCACCCGAgTGgATGCCgGAGTCgCCCAagTAcGAaTTcTGCTGCCAC
ATgAGgGTCTGCTCCTTGGCgGAtACCATcGGCGGCAgATCaGGtGGATTgTATTGATTaTTATGcGACACTGCA
Aaagattgattgcaaaacgttttagagtgaattgacaaaaatatacactccaacttttctaactcgaatcaccga
tgtgtttcgatcatttccattgcaacttaatcgtgttataagaccccaaagaagcagaaatgaagtgtaagaata
atttttgtatgctcttctttaacttgttaacatctgtctacacattcatggtaacttttcttttttaaaaccttt
tgaagtggaaaaacgacagagtagaacggaatactgagtgcagcccaccatctacatataatgcaacgaattcgg
gtgcggggatgcacacgctttaaccctctgcaacccatttgcatgcgctttcgttaaaagatggccaaatgggAA
AcGACAGcgactgacagcaaagtgagcagcatcccaacagccggcgcaaaaaatgcaaaaggAAAActttGAAgC
GTGACAAATTGAaCGCTGCAGGATATtcccagaaagttcagggcgctgggcggaatgggtttggtgcagggggtc
agatgctcacacatgagagggtactggcaaaaggatTTgTGGGCGTTTTGTTTGCCACTTcagtCTTAATTATGC
cgttccaggcccagctttttgcctttgttgttttacttatgcgcggacacagcacggccacgccccttctgtatg
cattcgtaattacaaacttcactgctcttcgccatccactctgcaatactacagtcaaatctcaatagatcgaac
acggtgctgaatataaatgactccataaaaagcagcattgaaacatgctggtaacctatggaccaggtctccaaa
tgtggtctctgagttcaacaaaatggtttagcccacagctgatgaattttgttcgctataagcacatgcgactgt
aatactgtaatcgcttttcgtttcatttcccaaatcgattaagcgttttttcttcgccatatccgtcgagtgggc
cacgcacttgaatggagtactgtgttgggatggagggcgcgggcggagcctttaattgcatgttgccgcttacta
attaaattctgcacagcagcagcgccagaaaaaagcaaaggcagaagccaagaaaaatgtgcagccaactcgact
gcgagttcgggagacggggtacgagaacaaggtccccggagaagaccaaggagcgatggcaaaagggtggcgtgg
gttggagtgccacgtgcaagtacacgagtccttgaatgtgtgtgtgcgtaagtggatagcatggggagggaatgg
agtttcaaaggatagtgagcagcggcctactcaagggggtttcggggttgtacagcaattagttgaaaactaaac
taaatacttaatagtggtcgaattaaaaggccacttcctaaatggctatgaactgttcactactgtcgtcctaga
tattgacattcctcgactttctgtggcaaaagtgatgggagttcaatgaagccaacatgcattaacgagctcctc
ccctttggtgaagtcctctcctgcgcctctgagagcctcaccaacgcgctctgcaaatcaagtgtcaaaaagaaa
tcttctttcctactccgtttactgcgtcagcggaaaagtgtaaatttcaaactccgaagtagaagggagcgcttt
tttttttgatgaatcggatataagcacaggccgctggtggttgatggcccaacaaaaaaaagatcatcaagcatt
acaagtatgtagatgtacacaaattatttgtctggggtggatggatatagttgttaccctgtattctgcagacaa
cccacaaagggaatatcagaaacaaatgacaaaagcaaatactttatgtcaaatttgccaaatttgtcaaaaaca
agcatcgctccctcatttaacgttggagaggggttgttattgtattgcgatacggggataattgtttcacagata
caatgcgctgttgcatccccttcatagggccatgtattctgactatttatcctaaatgttctaaactctagagct
accatgacttaattgcgtccattgaaacgcaatatcatctctaatttgatgaaatcggatcctgtatacaactgc
atttggactgggtatacaaaagcccaaagtggaacactctgatacacagttaactttgatgctctttgcatactc
cctggaagatgggaaagggaagagtaccgctgctggaaaTACTTACTGGTtCGATTCTGGGCTGGCATGTAACTC
ATCTTGGTGATTgAGGCGcTTTACACCACACCTGcAAGAAagagacggagagtatatgagtaatgtgctggacag
tcaataacatggagttcgtgtgtgcttcggatggagaccacggaactccactaaatgggggccccggaaagaagg
gcttgttgtgtttgcagactgccaacagacgcagatatcgtccgttagtcacttattctagtcgttggtcttttt
ttttaactcatttccgctttgagatgccgaagcataatatgaaatatgctgcgtatacaaacaaacgcactaata
cattcttacgcaggtagaacgggtatttgtgggtatgtgtgtgtctacctgccgaagactttggccacgaacctt
gagttatttaattactttgtttagcactctttcaaatctcatgcactccaacaaaaaacaaaatggattTTTCAC
TTctctcgaaaaagGCGCAGCGgAAAATGCGaCCGACCagcacgctcgtttaaacggaacagaatccagatgcgg
agagcgcaagcaaagcaaggcacttgcaacaccgcgcgtgcggagtgcgggaaagggacagggaaagagactggg
agagaaagtaaagggccgcggcagtgcagcatacaaatgcagtgctgcgcagAGTTGCCACACatcCaaacgatt
gtgcctACACAcacatactcgcgtaggcagctcagaaagaatcccaactccatttcagttgtcgattagataaaa
cacctaacgataagcctgcctctagattcgaagaaaacgatttcctgtctgtggcattgtttacattccagcgag
caacaaaacaagcgcccgatttacgggggaggaatacataaaaatgccgtttgtgtgtatccagatCATACACAC
ACACAtACACaggcgCACAtccagcgaaccCCTgcccacccccgcgccgacttgtttgccatggctttccaactt
tcatggcacacagaaactttggctttccaaacggattcactaccgactaacagtactcaccgcgtccaaggaatt
taagtctgctttagagcaggatttatttatttaaaacgctataagaaacaaaataacagcgaattgtctgctcga
gaaaaactgtgtatatggcgacgaaacccaactagcgatggcctgctgctgtcccgataactcgatgggccctgt
gcgataggccaaaggaatttttcaaattttttttgttctgagaacacaaaaatctcacgaaatttgtatagcatt
tcatccttaagaaactcaattcacaatatttataatttagctaaggcgaatttatttctagttcatgttatcatg
ttatctcgaactcaccgtttatcttgtataaacatttaccaacacaagcacctgagtgtacatgagggtgtatga
caacacaggtacgaccaaaaactattgtttttgggcgacgaattaaagaaatatctatgactttactattactta
ccgcttcgaaagtaaatttatctgctcaaaggcaggttaacgcacttttgacgcacttagatatttaaattcgac
aaaaatccccgactatgaaaactgtgtatatgagcgcagaacagataaccgataactcct
 
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Enhanced BLAT Score Card  (Back to Top)

 Drosophila EvoPrinterHD - Generate EvoPrint and EvoDifferences Profile

 Gene Name: arm
 Reference Genome: D.melanogaster
 Click on individual Species and Composite eBLATs to view eBLAT alignments.
Score =   Total number of aligning bases.
Start/End =   First and last aligning bases in reference sequence.
Ns =   # of Sequence gap(s).

  View test species eBLAT to identify gap(s).

R/D =   Sequence rearrangements and/or duplications.
  R =   Total # of aligning bases unique to the 2nd or 3rd eBLAT
  D =   Total # of common aligning bases
Red =   Common to 1st, 2nd and 3rd eBLATs
Brown =   Common to the 1st and 2nd eBLATs
Magenta =   Common to the 1st and 3rd eBLATs
  D.melanogaster (Ref Sequence)
  Score Start End Ns R/D
  9360 1 9360044 
  180 2407 67210 0 / 136
  134 5685 86630 0 / 90
  All Alignments 1st None

  D.sechellia
  Score Start End Ns R/D
  8617 1 9360134 
  103 714 27220 0 / 68
  138 702 57620 3 / 100
  All Alignments 1st None

  D.erecta
  Score Start End Ns R/D
  8427 87 9360017 
  131 2466 67210 10 / 103
  127 742 65820 5 / 104
  All Alignments 1st None

  D.simulans
  Score Start End Ns R/D
  6888 1 9360138 
  101 2495 27790 11 / 48
  172