Nematode EvoPrinterHD - EvoPrint and EvoDifferences Profile

Conserved Sequence Parsing Instructions
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Conserved Sequence Block Name:
EvoPrint
Evodifferences Profile
Enhanced BLAT Score Card


  
    
	
	  C.elegans unc-105 locus Genomic EvoPrint
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      Black capital letters represent bases in the C.elegans unc-105 locus reference sequence that are conserved in the C.remanei  and C.brenneri orthologous DNAs.


    Reference genome repeat sequences: Blue underlining indicates single-copy repeats and Red underlining identifies multi-copy repeats.
    
(ORF orientation in 5' --> 3' direction)


 gttttcagcttcagctcccctcccccaaaaacttgtgaaaacgaaaaaattcaatttcctgtatttaatctacaa
ttttattgtcgagaattacacaaaaaaatgacgaccagtatcgaaaaatcgagttatcacaagttaccgtacgat
atatgaagggagtgcattcataggaaatgcagaaaaagaaacgggatcataattcgacaaaaatgggtaggtagg
cgaggagagatccgaaaaaacattaaaggataaacacagaggaaacatgaggacaagaccattggacagaaatcc
cagaataatgataataaatttacacacgcaaacacatcgtcgatgttcttcaaacggcaaaaacggcacttcgaa
aagctttgttaaatgattgataactgattctaaaacccagaaacttggtatataataattattggttaaatccaa
ctattctcactacttgcagagtgattaatcggtgttcggatttgatttctttttgatattcctcttatccaattt
tagaggagttcgttgctcgacaggttttggtgctcgtgcccacacctcatttgccatttcttctttaatcttctt
tcttactctctcttcttcttccacaattggatacattcgagcacgaaccttaaatgtttaatttatagagttgtc
caaaattagagaggaattcttacatcatcggaatagtatcttttgaagacagcctctccggaacaatactcggtt
gctttgtaaacatgaagtaatagctgaaaaatattaggatcaaaataaacaatttaaaattaatagaaactcacc
cgagggaagcgtgatgtaaaataatgcaagaactgatctggaatgtctccaagagattgtctgacatcttctggt
aattctctatagtgatgcttcttgttacgcattgctcttagcaaatctcgaactgaaaatgatttgtatgttctg
aactttcttaaatcttccttcaaagcatcacaaatcttctccctccatccaccgcatacaactattcgagcatct
gtttctattcttctcacaactggactattgtcttcttctttctctacacgatcagatacatccgaaaaatatgct
aatcgcttttcagatgtccagaaaaatggatgattcaagacggcatcagcggtcaatcggtgcaatggctccacg
ttcagcattgaagagatcAAGTCATCaGCcAAcGACCAATCtgcaaaaacactgttatgtgagtaatttccaaaa
ttctatttcttaccatccaaatctgccaatttattcaatgtgtattctccatttacaatatttgcttgtctgtgc
aatgatTTTCCAAAaGGATGaGTaCCcGagGttAacACATAATAGAAAATACATCCaAGtGAGAAGATATCaACt
GGATAaGAaGTaCTtGCaGAaATaAgaACTTCtGGAGCAATCCAgCCATCggttcctgctaatccagacgcaata
CCTCTtGAaATtGAaTTcTTTCCaGGTTGaACcCtTTTACAAAgaccaAAATCtGAGATgACTGCtCtCATTTct
CCtCGCTGaCTaGCcaTTGTaATtAgaACATTtTGTGGcTTCATATCTCgATGcACaATTTTtGAaGCATGaAGa
TGTGCcAatCCATCgGTTGcctgtttcataatgtctcgtagagcaattgtaacattttgttgaacctctTTCtGC
TCaACAtAATCATTCAAaGAaGCtATgCAaAGtTCGAGtGCCAAATAtcgaAAtTGaCTGTCtGATTCCATaCAa
AAGTAtCtGATaACgTGtGGATGTGTatcactttctcgtaataaatccgcttctctgtgagcaaacttcacgaat
tctgaaactactctctttacagcaacttctcttccatcaaaagttcctctataaaccacagttccttcacatcct
gttccaagaatatctgatggactatacatcaacttgctaccaaCtGCCATCCAAcCctcgggaatttcaattttt
ctattcgcCCaTCCAAAgCTTCCacgaTTCgattgTTTtGAtgTcTGagCACTTCtagattctccgggattgttt
acaatttcgaaggaaTCCaTTCttgacgtcgacttctgttGATCCCATTGTCTTCCACATTGCCAaattacagtt
aatagtaatgcaaacatcgtaaccagtgtagcatagaatggaataggatgattattgagtagaagcagaatgaaa
gatgtgtcctcatgcttctgtggctcaacaggtcccagaagttgtggtggaggccgttcaattgtagatccaatt
gccttatgaggtccaggaactggatatcttgtcggaataatcgttgccatcgtcatcaTTGGtCGAtcatgatat
cctgcaaaaaattagtgaaatattatatcacacttcccctctttcttccgtcattcctcaattcacccatcacct
tgaaactctcgaacagtgaaagaatttcgacaaaaagagagaaaaggtgggaggagaagttaggaacaaaagaga
gatagaagcacatacaaacgaaaaattccgctgctcttcgcactctctttttttctcgcggtgagtgcgaaattt
tgcagaatgagatttgagagctcacctaataataagtattctccatccgaagttttatgagtaattgatggagga
atatttcgaattattggtctccgtggtggcaagtactcttctttttccatttctgtaagtgcaattggagctgga
ccttctagaagtggtggaccaagaagttttggagaatatgtaatggtttggtgatcgactagagcttcgatagca
taaagtccaaatgaagattctccaacgaataaagctgggaagaattgattcgtgagggatgttgtttgaggatct
gcagcattgacacccaaaactgttggccattgatccacggtgaagatattctgagaaaaaagagcatagatgaat
gtatttctgatcagTGACAAATTCTttgcGATATTATGATaTTTCccacactaaatGTCAATCTTTTGTCATCcC
TTTTaacctacaaacatttacaaaaaaaataaaAAGAGggaAgAGAGAAATCAGAAGCTCAACGAGCCTCCTCGG
GGcGTCATCAACCACCACCTCAGCTGTGTCCAACTGTTGCgTCTtcctgtcggctctcgAATACCTcTGGTtagt
ccgtggatcgcctCTCACACATTCAACAcatacataTACACACACAgatagAAAAAGATACATGGaTgagatgtg
caggAGTGGACGTGtcgatggtgGTGTCCTgcctccatcggtcgaagagccaagcttccagaatgaagaaaagag
cttGAAACGTAAAATATGATGAATTACgttTATGATTTcttccctctcaatctaccttcatttcatttttctttg
tttattactttagtgtgaaatcttttaaataatattataaaaaattagaataccttttaactttggtaatgtttt
agatataaactatatttcatttacaccttaacaaaaaagaaaatcattagtcaaaaacttcgacattacagtacc
atcattacctaagcttgatcttctgattccacctagacaccagtgatcagaagcgaaaccccattatgtttttct
taacattttcattttgaagacttctttactaccagtgtgatgagatctttgatataaataattagaattctataa
attcttggtatttctaccgtacactctatttagagcctacaaaaaataatgatacttgaaaatcaaacttaacac
caatgttattatatcttcacaataatgttctaagttcatttttacagtttccggattactgtagttggaatataa
tatactgaataataagaaatgtaccaatatattgtttacaatatttttgtgagaactgaaaattgaatTTTTTTT
TTAATTTaaaaatttctatatcatttcaagagaatgataaagtatgacttattattaatattaaaaaacgcattt
ccaccactgttcccttcgaatctttcatttgctttttgtttCTctcTTTTTCAttcctCTAttATAtCATCACAa
gcatTGCACTCaGAAGCcATTtATCACAATaTCTCatGTGTGtaTGTGtgtgtgtgtcagaagagactcctcgcc
caaTTGAATCAAATCAAATtGCAATTAGTCTTtTTCTttatcattcaaatgacatgctaattttttcagacaaaa
cgtgccaatgggagcATGGAGAATGcGTCGTCAACTgcccAgcTaTCGATAGAtatCGAaGAtaatggacaggca
gcacagttaccaccacagccacctagtAGgCAtCAtcAATGGGCtCAgGATCAaAATCGaAAgAATATGTCaTTT
GAGAAatcaggacacggtaaaataatttggtgatgatgaaaatataagttttaaccgtaaatctagaggttattc
aaatattaaggattactgtagatatatttgagttgaagaataatatctaatgatatagtaattaaaagttagaaa
aacaacatttcttataaacaaaatgttttttttgcgtttaacttcatattttcagcaacacgaaatgcttcagaa
gacagtaagaacatcagatttcttggagaccatgctccgcccagtggagctcgaaaaagatctcataacaaacgg
ttacacgactggagacggcgactgtcagtcaatccagaattactgagaaggcatggtaagatctacttattaaaa
tacacacctggtcataggaatctcatagattaagatgcaactagattcgcaccgccggtgtcgggcagcctccgt
tttattagtttttgcttttttcaccgaaaaagaaatagaagcatgaaaaagttatgacgaagagcgaggcgcaag
agttcttcttcgctctagaacaaaagacaaCaGAGGGCAGGCATTTTcTTGTGGCtgtgaTTCaCTTCTCACTTC
ATACAtCATTttGTCgtCtactaagacaagtatccagcatctaggaatgctgcatcttgcagcttctagaaattc
tcagattaattctagtaagctttccatattcccccaacatgataagtttttgctcaaactctctaatctttcgga
ataacaacgtttgagcacaccttcaaatattcaagtatacagtaagataatctatgaactttatacataaaggaa
actactttaaaacaaagattgaacaccaacatgggattaaaagtacatttccaccttcgctttcatctcttactc
ccccatttcaactaTCTTCGTATCGAACCCGTATAGATCATTGgATCTCTctatatccctcttttatctgagctc
cagagaaaaatctctcaccaatcagcacttgacgatgtaccCTCTAtAACACCATCGGCGGgCAACAAATCAACC
CGAACAACatgaagtgaaaggagtgagcaTACACGGATCATCagccgctgtgaagaaagtgggagacatgatCAT
GTCTGCGgactctcgttgaatgggctctatggtcttgatttTTTTATTTCTTTTTAACTGCTCAATCAACACATT
CTTacgatacttactacattctcacaaagatacttatcgaaagaatagtgtagaactgaaaaagaagaagaaaat
taagtttttggaacttctatctgaatgttgaaccactacaacaatcagtatcagttgcaagaagaagcacaagag
aaaatgtgacacttacaattcgttcaaatcaatcaaaatcagaactttctagagctcaaattttttactttgatt
taaaaattgtctgtctttatcgtctctaatttcaacaaacctctcccaattgtcgctgctcctctcttcggtggt
aggggcccctgtgatgctgtgccccgagtctaagaacaccactttttctctactattacacattcttcctacccc
tccattgcggcactCATTCCaATCCAATCAGACAGATATTTTGTCACaCGAGACgGAAGACACAtACACAcacac
acaacgccaaACAACTATCataCCTaTATATCccctctataccaccACCACCAtcatcgtcatcagcgtcttcaa
ctatccaagtTCTaactCAATTCTTCGTCATGCGTCTTCGaatTctGaCGAaGTCGtCAATAGAAGAAtaaaata
attaactcaagatggcAGAAGAtagaataaaatcAAAaTtgCGCCGTCCGGCGTCaATtGAgtccacgatgtcga
gcaggactaagccaagacataaaccatctccaatgtcaattctgATGCCaCATcTTATgGTtGGAgAaTCaTTTC
GtAAATATCGACCaCaTGGTAAtacagtagttgagaaagatatttggtaatttgccaaaacagtgcactattttt
agtgtatgtttttaatgcatctccaagatatctaacttttctgctcatcttttttctATCatCCCcctcAAAAAa
cGTTTTggAGTAACCTGATATCAACAAACGAaATGACAcAgcactcatttctgaactagaaaacgAGAAAAGAGC
AACAgcTTTcgactatcaccCAGTGCAAaTTtaactttttatttttatCaCTAATtcttATTCTaatggaAAAAT
cttcaaaaaatcaattgctagggtttgacctatcaaatgaagatccctatggtgtatcacatcttcggaggctaa
gttctggtcgggaaaaatttggaaaaagtatattatttataacttgatttttttgttttcaggtcttcgaaacat
acggatgaatggtcatttagactggaaccagctcagaaaaagtTTCGAAAAACAGTCaACATTcCAcGGAATtTC
ACATGCagctactgcagatggAAAaTGGAGATggtatctcatcttatattcaattagtaataacctagatatttt
gttttcaGGTTcTGGTAcAcAGCatTTACGATATGTCTTCTtgcactgCTCATaCAgATATTCTTTcTcATaTcA
AAATATCGtCAATAtGGtAAAACgGTcGATCTTGATGTgagttagaAGCTTcacctcaataataacttttaaaAA
AATTTTAGCTCAAATTtGAAAAcGCTCCATTTCCaTCaATcACAATATGCAATTTaAATCCgTAtAAGAAaAGTG
CaATACAgTCGAATCCtAAtACAAAAGCtATGATGGAagcatacagtcgacggataggttctggtgataaaactg
aaggaattgcagcagcactatcagcaactggtggactacatgctaaaggtgaattttaagaaactaaatcatgac
aaattgttttaaaaaacctttcacagggtaaagatttttgaaattctaaatataaaaagtcaatatgaaatttca
attgtgcggaaattgcatctaatcttcgaattttctcacacacttccttccaaaaagaattcacactgtttgaaa
atgttttattataaactattcaaattttcttacttttacaataccaaaattTTCAGTTCGTagaGCAAAAcGAAA
AGCAAAgGGAAAaCCaaGgTTACGgGAtCGTCGaTAtCAtCAAGCaTTcgcacagTGtCTaTGTGAcATTGAACa
gcTaACtggtgacagaAAAGGtTCtTGcTTTGCgGCTTTCAAAGGAAAAATAGAaaTcGAtacaaataatactgc
tggttttATGAATtTgcatACatCTCGATGTCTTTGTCAAcTaGATACggtttctaaagcactttggCCATGTTT
TCCaTGTgAGTTcaTTTTgtacaaatctagaaagtatgttcacgatttcagattcttcgtggaaggagaaactat
gttcggaatgtgtggataacacgggacactgtccaatgagattttacaaaggaaatgaactttatgaaaatatca
aagagcaagttgatttatgtctttgtcataaagaatacaaccattgtgtttctacgagagatgatgggataattc
ttgaaataagcccaaatgacgaactgaatgatttggatattggcaaaaaaatcgcatcacagttgagtgctcaac
aggaaaaacaagccgaagttactactacggaagcaccaacagtgactcaggcgttaggatttgaagaattaactg
atgatattgcaattacttcacaagcacaagaaaatcttatgttcgcagttggagagatgtcagaaaaagcgaagg
aaagtatgtcctatgaattagatgagcttgtattgaaatgctcttttaatcaaaaagattgccaaatggataggt
atgtattttaatagtcataatatatagagaaaattgttgaaattcagagacttcacgttgcattatgataacaca
tttggaaattgctatactttcaattacaatcgaactgcagaagtcgcgtcgcatagagcaggagcgaattatggt
cttcgtgtactgttaTATGCtAATGTtAGTGAgtatttaCCAACAACtGAaGCtGtcggatTTcGGATtACtGTA
CAcGAtAAACAcATtgttccgTTCCCaGATGCttTTGGTTAtTCtGCtCCAACaGGATTtATGTCgTCtTTTGGA
GTtaGAATGgtaagttttgaaattcgaaaattatagaaactgatatatataataaagtatggtttagaaacaatt
catacgtctcgaaccaccatacGGaCATTGtCGtCAcGGAGgagaagatgcagcgacgtttgtgtatacTGGtTT
CcAaTATTCcGTaGAgGCaTGcCATaGaAGTTGTGCTCAGAAaGTGATagTtGAagCgTGcGGATGTGCaGATCC
AATGTATCCagTtGCtGAgATGTtTGGAAataatactaAACCgTGtCAGGCTGTtAATATGGAcCaaAGAGAgtg
cctcagaaatactacactctggtTgGGAGAaTTGTAttcaAAAGGAaaagaagcaatcATTCCtGATTGcTAcTG
cCATCAgCCtTGCCAGtaagttgaacgttttgactcatttacaattctattattttagagagaccaactatgaag
ttacatattcatcaGCtCGATGGCCaTCaGGaTCcGCAAAggTtATGGAgTGTtTACCaGGAGAcTTTctttgct
tggAaAAgTAtCGaAAGAAtGCaGCaATGGTTCAaatattcTACGAaGAaTTGAACTAtGAAACAATGCAAGAaa
gccCCGCgTACACtcTcACaTCAGTtCTcGCtGATCTTGGTGGTCTcACaGGtTTaTGGATcGGtgcatcagttg
tatcacttcttgaaattgtaactttaatcgtatttgcaacacaagcttatgtcagaaaacggaaagggtgagtcg
atattttttgtttcaaatccctacgttccacctaaaacatcctttgttcacaatctacacttctaatctcatcac
gatactattttgttcatcccaatacccttagaatagagcatggccaatAgAAAAAACtagagtTGCAcGTTTcGC
ATGGATTCACagcacacacaACATCACagatGTcGTGATCCATAtATTGCAGCTCgAttTCGGCCCAATCacaTC
ATTCagtacccgtccataGAGCTTCCAGgGttTCAtTgaataCtCTtcaCAAaAGCAgtACaActcaAAGTGTca
aattatctgtgatgGATATtCGATCaattaagTCGaTCcAtTCGAATCATTCGTCGAAaAGcAaacagtcgattc
tcattgaggatcttccgccagcaattcaggtagataattatctcaaatataaaacaagatatatgtaattgcagg
agcaaagtgacgatgaagaagaaacaacagaatcttcaagaacaaatggttcatgtcgatatctggcgcctggag
aagatcttccgtgtctttgcaagtatcatccagatggttcaatacgaattatgaaagcattatgtcccgtacatg
gctatatggttcgtcgaaactatgactacaggtaggatcttgttttttttcaaaacctatattcaaattcattca
attcaagcgtgtcgaatagtgaagaagaagacgcagaagacgaaGTTCATCgagagCCgGAGCCattctATtCtg
CcCCgTAtGagCATCGcAAAAAGTGAGAGaattagagtcAGAaAGAaGAATGGTTTGTTGTGGTACGCACCTTTT
Tgtacttgaaaatccatagctagggaatgtttagatagatgaaagttacaagaaagaagtttgggtttttcctgt
tttTTTTTTGCaCTTCTGTTgaaatctaTCCTttcacttcataacacttttccttgggaattcatttttctaaat
aacttctgtaataaagttatagcaaaattcacaagcAATtTTAGAAGTCAtccTCaCAAAAAAtctgttcataag
aaatcaacaacggcactcgatgaaGATCTaGCCATGGAgGCaCAcaAtGATCCagatggtaatCGaCCAGTcTCT
CCAGAagaaccataaatcggtgaataaagattcccaactcccccaaatcttatataaatgtacgttgtatctcac
taaatatagtttctctccttttcaaattttcacaaacaaaattgttcaagcttTTCAtGTTGctgcTGTCTTTCT
CATTcTCatTGATACaGGTTgttgatatataattgTTTTcaCtGCAATAAATATTGCaaacgTACCTTTGCtACA
TTtTCCAtTGTCTCttttCCCATcACTTCaAatggtaatTTGTGcAatCCATCatctcgaagaagataaagtgca
actacaGGTTGTTTcagatcttGCTCCCAtctCATTTCTCCTGAAAcAAAAttacatgttaattgaaaatcattt
tatggatatgaaactaaatttaaaattaaaaaaacaacgtttctatttgatattttataaaccaatatttaacac
atgaactcatgcgaaaaaagaaactttaaattgttgaaaaattcttgacttaatataaataagaaaagcattaaa
taattaacgttacatattacccagatgtaaaattttgcgatttttacactacagatactgtacccggcctcgaag
ctaccgatatttttaacccaaaagatgtgtgtgcctttaaggagtactgtatttcaactcctcgtcactgcggag
ttttttttttcaagttttgattccttattcttatttatcgaaaaaaaataagtgaaaattaatggtatcacctca
aattttgaatgagtgaaaacttatgaaacatttaaacgttaaaaattacagtaatccttaaaggcgcaagctttt
ttgtgtttgagaaaagcaatcgcttcaagcccgggcaccgttttttggcgcagaaatcgtaaatttccgaatgtg
ggcagtaatgcaatttgaataattaagaaaaattgaaattcgcctactgaaaaagtctcatcggcgaatagcctc
cgagtttcaagagtttattctgattacgggcaacaaaaaacttgccaacagtttatttttcaacaaaaataattt
tttatttattttttcaacaaagataataattttttagctattcacgatttatgtgatcctagcgttttccgtatt
gattttttgttggaaatttgagcaggaaaatgtttttttcaatatatttttggggaaaaaagtcattttttattt
ggcaattattttttagcttaaatttatatttcaactttctagaaaataactgccttcttcatttttggaacaaat
aatattatttatgtttattctgtttaatttaatattgccacttaccagtttctctatcgaaagtcagtatatatc
catgcgacgacgatgcataatgcttaaatggccacgtattcacttcaggcaacaaatgggcagaataatcattga
atgttgcattccaggtctttccacgattcttttcatcaaacatagagaccctgtattccGTTCGACCcAaaaaaa
ttGTctGTTttTGATTtgcagggcagattctATCcGctgacGCtGAtGatAGAGTTTCCacCTGtaAAaataaaa
ttttatcagaaatattcaacagtatatattcaaccTTTAAgCCtGTttTtGGATCAATtccaaacCAaACatctT
TCTTaCTTCCtGCgTAtAAaAtTCCatCaTTTCCTTtgCAAGGtGAtGCaTGAACtaattgtGGaATAtTGAAtG
GAAGTTTTTTCAaaGAACTgtTTTTCAaaacataaagtgatccatcgagcggattcggaagaaatgtaaatccct
gtttgacagcagatggagatcgtaaaacaggctctgaaacaaagtaatgtgaattttcaAAActtAAAtttAAAA
AAttaAACCTTCTtgcaatgtccattttatttctcccgtctctgaatccaaagctctcaaacgtccatcaattgt
cgaaacaagtatagttgaagatgttttctcttcgtcgtctcctattgattcgtgatcctgaacaacgaaaaataa
tgaaattttgttttttgtagtacagaaactcacattccggaagccaggtgtgctaatacaaattacagaggagaa
gagcagcaaaaaaataaatgtgaatagatgaaatgttgctctcatttcaattgcgaattattttcgacgccaaaa
aatctccatgaagacgagagcggggttgcttagctgcaaaaacagaaaatcaatagagagggtttcaccaagtgT
TCcacaTATTCAaattttgcataaaacaAcgCGATTGCGAAATTataataTTTGTTttgttaccaaaacggcgAt
AATAATGTgTGTGtgcgaaatAagcCAACGTaataaatggaagggaTACGGTGcacaagtacgcaagtacacgct
gatcccaaaatgcagacatttgtcaaccgtactccagccagccggctgcgaactttttttgaatttttaaacttt
tccttttttagtttctttttttcacaattcattcgatcagatcttttttatgttcccagagctcgattcgccttt
tattattcagaataatcatttctcaatcatttgcctcctatttaatttcatgaaaatttcagccttagagtgaaa
gtctttctttcagaaacgataaagttttactaaatcagttttgagaatctaacttgcttaatttctcgttgcaaa
tagcatggaattgtttagaaatatttcgcgcatagaaatgcatattcaaatttgatattggagtggtaaattttt
tgaactcattcagctcattctagctcaccatcatttactttctgtgtctaacttaagatttgatatttttcattt
gttttctaaaaAAACCGATCTGAATGCACTTTTAagcaattttcaaccgattccgatGTTTgTGtTGAcGTTgAC
GtcGaCTGaCAAACAAATCGgcgAAAAAAgtcaatttCGATGggTCGcCAGTGCTGAGAAATCGgagagagaaga
aggagagTATGCACTTTTgctgTACGCAAACTTTCTTTTTTtGaagagaaaaagacatcagtttgacaatccact
tggtctcacgaaactgtTTTCACGCCTCTatcctttttttgcagaaaatgcactcaAAGAATGTACAttctataa
accaacgtttttgtagactttgaaaatacagaccattttcatcagaaattcacatcggttctgagtatattccat
agttgacgacaaatataaacattttccattttctctttatcagacctcaacaaaaattgccttccgtttttacgg
tatgactgtgtatggcttccggttcaactttgttcaatacgttttccacatgcttcaaactttttcagtacttca
caacaaaacagtattgaatttattttcttcaggtctatattttcattttttgaactttataaaagtggtaccatt
gaacatgcactGTTTGACCTTTTGCtccttcacatcagTGATATTTtATGcttcttcttctctcttccatcattC
TTCCGATTCATCACcaggagaattcTCTTTTttGCAgaCGCCgctgctgcgacacgGACACGTATGCGCATGCGC
TCAACTCTCTGccGTCTCTgCtttttgtattattttttcgtctcgcctcttCCtCGCTTCGTCCTATCGATTCAT
CtATCGgtGGTGCCCTtGCtgTGTCGcCGCGtCGCCacggccaTTTTTTgtagTGTCCCttttacgctcccagCG
CTCACCCCCAGTCacatcttctttgctcagcagttcttcttaaagaacgttagagttctctagaggtgcaagatt
ttaacatcgggctcttctttcaaattttgtgggctctgcttcaattttcctgccgaagcacatgaaaaacaacta
gtcagctatacatttcaatgtttgcgtacgaatcttttgaacacaaaaacgaattaatttcagatattgttgacc
cttttccgccaaaatagccgctctttttcgtgcccacctcattctttttctgctctttGGAGCCATGGCACGATC
ATCTCtggATTGCAAAATTGCAATATCTTTtAACAtCACaCtcaccttccactaggataatctccattcggcgCA
ACTGCCactgCtCtAAGCTATCCGATTTCAAAAAGAGGTCAGCTGTGGTGtGTAcaagcagaAATTATCATTTCC
GTTCTtcacatcacagctagtttcctatttttgtTGATAACCtcacTGGCTCCatCTtTCAATaGTTACGGTTTg
TgTATaacccCGTGTGATCAAtAAACCAcgaTTGTAAATCAactgactgtTCTTCCTCattgTCAATCAgatcca
caatcTGgATACggAATAAaGGGTATTCCCCgtctgtatgcagattgatatacgtttcggttgtctaactcacta
ttctttttaattttctctgtcccttccaaaacgctgtaatacaatattttaaagaaaagtttaaagttctaaaat
atttctcatattgAAAGTGCAAAAAACtTGTTTttacatgactgtcaccttttggccagtcaTGTCCTgagtaAG
AACAAAGggtCATTTATcgGGCCaTCTATGCGccgcacatcgcacattcatcaatagtatagctcttcgcaacat
gtaggaTGATGCACTTTcgatatAGACActaattgtCGTCGTGTTGGTTATCAcaattcgctcttatcattcata
aacccattcattatctttgactgcaacacactcgttacAGGTGTGTACAATTCGCAACATTTTTGGgTaGtgagA
GCactgacttggCCGTGATAACAGAAGAGAagtgtgttattTGTaTGCGCACCACTCAACTCATCTtctttcccc
cTCGTTTctcccccgAGCGGcAGtaGGTCCaatAAGATTGTTGCACTTTTGGAAttGGTCAtctcttttgtagct
tgcatttgtatttctctgatccctctattcggaaaaaaagtattgcttaaattatttctgaagtttgtaactgtt
tgttttcagatttaaatagaaaattttatttcactagattttgtagtgcctaaaggcgcacggatttattcagat
aggtctcggcgcgcataaaagtttatggtattttttcgaaatctgagttttgaaaactgatttttaactgttttt
cacagagttattaaa
  
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unc-105 locus Genomic Evodifferences Profile - Relaxed EvoPrint

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Black capital letters represent bases conserved in all species and colored bases represent sequences present in all species except C.remanei or C.brenneri.

Reference genome repeat sequences: Blue underlining indicates single-copy repeats and Red underlining identifies multi-copy repeats.

gttttcagcttcagctcccctcccccaaaaacttgtgaaaacgaaaaaattcaatttcctgtatttaatctacaa
ttttattgtcgagaattacacaaaaaaatgacgaccagtatcgaaaaatcgagttatcacaagttaccgtacgat
atatgaagggagtgcattcataggaaatgcagaaaaagaaacgggatcataattcgacaaaaatgggtaggtagg
cgaggagagatccgaaaaaacattaaaggataaacacagaggaaacatgaggacaagaccattggacagaaatcc
cagaataatgataataaatttacacacgcaaacacatcgtcgatgttcttcaaacggcaaaaacggcacttcgaa
aagctttgttaaatgattgataactgattctaaaacccagaaacttggtatataataattattggttaaatccaa
ctattctcactacttgcagagtgattaatcggtgttcggatttgatttctttttgatattcctcttatccaattt
tagaggagttcgttgctcgacaggttttggtgctcgtgcccacacctcatttgccatttcttctttaatcttctt
tcttactctctcttcttcttccacaattggatacattcgagcacgaaccttaaatgtttaatttatagagttgtc
caaaattagagaggaattcttacatcatcggaatagtatcttttgaagacagcctctccggaacaatactcggtt
gctttgtaaacatgaagtaatagctgaaaaatattaggatcaaaataaacaatttaaaattaatagaaactcacc
cgagggaagcgtgatgtaaaataatgcaagaactgatctggaatgtctccaagagattgtctgacatcttctggt
aattctctatagtgatgcttcttgttacgcattgctcttagcaaatctcgAACTGAAAATGATTTGTATGTTCTG
AACTTtCTtAaATCTTCCTTCAaaGCaTCaCAAATCTTCTCcCTCCATCCACCgCATACAACTaTtCGAGCATCT
GTTTCTATTCTTCTcacaACTGGACTATTgTCTTCTTCTTTcTCtACaCgATCaGATACATCcGAAAAaTAtGCt
AATCGcTTTTCaGaTGtCCAGAAAAATGgATgatTCAaGAcggcaTCAGCGGTCaatcggtgcaatggcTCCACG
TtcAGCATTGAaGAgATCAAGTCATCAGCCAAcGACCAATCtgcaaaaacactgttatgtgagtaatttccaaaa
ttctatttcttaccATCcAAATCTGCCAAtTTATTCAatGtGtATTCTCCATTtACaATATTtGCTTGtctgtgc
aatgatTTTCCAAAaGGATGAGTaCCCGAGGTtAAcACATAATAGAAAATACATCCAAGTGAGAAGATATCAACt
GGATAAGAaGTaCTtGCAGAaATaAgAACTTCTGGAGCAATCCAGCCATCgGTTCCtGCtAATCCaGAcGCAATa
CCTCTTGAAATtGAATTCTTTCCaGGTTGAACcCtTTTACAAAGaCCaAAATCTGAGATgACTGCtCTCATTTCT
CCtCGCTGaCTaGCCATTGTAATtAGAACATTtTGTGGcTTCATATCTCGATGcACaATTTTtGAaGCATGAAGA
TGTGCCAAtCCATCgGTTGCCTGtttcatAaTGTCTCgtagagcaattgtaacattttgttgaaccTCTTTCTGC
TCaACATAATCATTCAAaGAAGCtATgCAaAGtTCGAGTGCCAAATAtCGAAATTGACTGTCtGATTCCATaCAA
AAGTATCTGATaACGTGtGGATGTGTaTCACTTTCTCGtAaTAAATCcGCTTCTCtgTGaGCaAACTTCACGAAT
TCtGAaACtACTCTCTTtACaGCAACTTCTCTTCCATCAAAaGTTCCTCtATAaACcACAGTTCCtTCaCATCCt
GTtCCAAGAATATCTGATGGACTaTACATCAacTTgCTaCCAACTGCCATCCAACCCTCGGGAATtTCAATtTTT
CTaTTCgCCCATCCAAAGCTTCCACgATTCGAtTGTTTTGATGTCTGAGCACTTCTaGAtTCTCCgGGATTGTTt
ACAATtTCGAAgGAATCCATTCTtgacgTCGACTTCtgtTGATCCCATTGTCTTCCACATTGCCAAATtACAGTT
AATAgtaatgcaaacatcgtaaccagtgtagcatagaatggaataggatgattattgagtagaagcagaatgaaa
gatgtgtcctcatgcttctgtggctcaacaggtcccagaaGTTGTGGTGGAGGcCGTTCaattgtagatccaatt
gccttatgaggTCCAGGAACTGGATATcttgtcgGAATAATCgTTGCCATCGtCATCATTGGTCGATCaTGATAT
CCTGCAAAaaattagtgAAATATTATATcacaCTTCCcctctttCTTCCGTCATtCCTCaaTTCACcCATCACCT
TGAAACtCTCGaacagtgAAAGAATTTCGACAAAAAGAGAGAaaaGGtGGGAGGAGAAGtTAGGAACAAAAGAGA
GAtAGAAGCACATACaAACGAAAAATTCcgctgctCTTCGCACTCTCTTTTTTTctcgcggTGAGTGCGAAATTT
TGCAgaAtGAGAtttgagagctcacctAATAAtAAGTATTCTCCATCcGAAGTTTTATGaGTaATtGATGGaGGA
ATATTtCGaATTATTGGtCtcCGTGGTGGCAagtactcttctttttccatttctgtaagtGCAATtGGaGCTGGA
CCTTCtAGAAGTGGtGGACCaAGAAGTTTTGGaGAaTATGTaATGGTtTGGTgatcgactAGAGCtTCgATaGCA
TAaAgTCCaAATGAaGATTCtCCaACGAATAaaGCtGGGAAGAATTGATTcGTGAggGAtGTTGTtTGAGGaTCt
GCAGCATTgaCACCCaaaACTGTtGGCCATTGaTCcACGGTGAAGATaTTCTGAgAAaaaagagcatagatgaAT
GTATTTCTGATCAGTGACAAATTCTTtgCGATATTATGATaTTTCCCACACtaaaTGTCAATCTTTTGTCATCCC
TTTTAACCTACAAACATTTACAAAAAaaATAAAAAGAGggaAGAGAGAAATCAGAAGCTCAACGAGCCTCCTCGG
GGCGTCATCAACCACCACCTCAGCTGTGTCCAACTGTTGCGTCTTCctgtcggcTCTCGAATACCTCTGGTtagt
ccgtggatcgcCTCTCACACATTCAACAcatacataTACACACACAGATAGAAAAAGATACATGGATGaGATGTG
CAGGAGTGGACGTGtcgatgGtGGTGTCCTGCCtccatcggtcgaagagccaagcttccagaatgaagaaaagaG
CTTGAAACGTAAAATATGATGAATTACGTTTATGATTTCTTCcctctcaatctaccttcatttcatttttctttg
tttattactttagtgtgaaatcttttaaataatattataaaaaattagaataccttttaactttggtaatgtttt
agatataaactatatttcatttacaccttaacaaaaaagaaaatcattagtcaaaaacttcgacattacagtacc
atcattacctaagcttgatcttctgattccacctagacaccagtgatcagaagcgaaaccccattatgtttttct
taacattttcattttgaagacttctttactaccagtgtgatgagatctttgatataaataattagaattctataa
attcttggtatttctaccgtacactctatttagagcctacaaaaaataatgatacTTGAAAATCAAActtaacac
caatgttattatatcttcacaataatgttctaagttcatttttacagtttccggattactgtagttggaatataa
tatactgaataataagaaatgtaccaatatattgtttacaatatttttgtgagaactgAAAATTgAATTTTTTTT
TTAATTTAAAaaTTTCtatatCATtTCAAGAgaatgatAaAGTATgacttattattaatattaaaaaacgcattt
ccaccactgttcccttcgaatctttcatttgCTTTTTGTTTCTCTCTTTTTCATtCCTCTATTATATCATCACAA
gCATTGCACTCaGAAGCCATTTATCACAATATCTCATGTGTGTATGTGTGTGTGTGtcagaagagactcctcgcc
cAATTGAATCAAATCAAATTGCAATTAGTCTTTTTCTttATCATTcaaatgacatgctaattttttcagacaaaa
cgtGCCAATGGGAGCATGGAGAATGCGTCGTCAACTGCcCAgCTATCGATAGATATCGAAGATaATGgaCaGGCA
gcacagttaCCACCACAgCCACCTAGTAGGCATCATCAATGGGCTCAgGATCAaAATCGAAAGAATATGTCaTTT
GAGAAaTCaGGACAcGGTAAAATaatttggtgatgatgAAAATATAAGTtTTAaccgtaaatctagaggttATTC
AAAtattaaggattactgtagatatatttgagttgaagaataatatctaatgatatagtaattaaaagttagaaa
aacaacatttcttataaacaaaatgttttttttgcgtttAAcTTCAtAtTTTCAGCaACACGAAATGCtTCaGAA
GACAGTAAGAACATcaGATTTCttgGAGaccATGCTCCgcCCAgtggagctcgaaAAAGATCTCATAAcAAACGG
TTaCACGAcTGGAGAcggcgactgTCAGTcaatccagaattactgagaaggcatggtaagatctacttattaaaa
tacacacctggtcataggAATCtCaTAGATTAAGATGCAACTaGATTcgcaccgccggtgtcgggcagcCTCCGT
TTTATTAGTTTttgcttTTTTCACCgAAAAAGAAATAGAAGcATGAAAAAGTTATGACGAaGAgcgaggcgcaag
agTTCTTCTTCgctctagaacAAAAGACAACAGAGGGCAGGCATTTTCTTGTGGCTGTGATTCACTTCTCACTTC
ATACATCATTTTGTCGTCTACTaagacaagtatccagcatctaggaatgctgcatcttgcagcttctagaaattc
tcagattaattctagtaagctttccatattcccccaacatgataagtttttgctcaaactctctaatctttcgga
ataacaacgtttgagcacaccttcaaatattcaagtatacagtaagataatctatgaactttatacataaaggaa
actactttaAAACAAAgATTGAACACCaacatgggatTAAAAGTACATTTCCACCTTCGCTTTcaTCTCTtACTC
CCCCAtTTCAaCTATCTTCGTATCGAACCCGTATAGATCATTGgATCTCTCTataTCCCTCTTTtatctgagctc
cAGAGAAAAATCTCTCaccaATcAGCACTTGAcGAtGTACCCTCTATAACACCATCGGCGGgCAACAAATCAACC
CGAACAACatgaagtgaAAGGAGTGAGCaTACACGGATCATCAgccgctgtgaagaaagtGGGAGAcATGatCAT
GTCTGCGGaCTCTCGTTGaaTGGGctctatgGTCTTGaTTTTTTTATTTCTTTTTAACTGCTCAATCAACACATT
CTTacgatacttactacattctcacaaagatacttatcgaaagaatagtgtagaactgaaaaagaAGAAGAAAAT
TAAGTTTTTGGAActtctatctgaatgttgaaccactacaacaatcagtatcagttgcaagaagaagcacaagag
aaaatgtgacacttacaattcgttcaaatcaatcaaaatcagaactttctagagctcaaattttttactttgatt
taaaaattgtctgtctttatcgtctctaatttcaacaaacctctcccaattgtcgctgctcctctcttcggtggt
aggggcccctgtgatgctGTGCCCCGaGTCTAAGAACACCACTTTTTCTCTaCTATTACACaTTCTTCCTAcccC
TCCATtgcggcaCTCATTCCAATCCAATCAGACAGATATTTTGTCACACGAGACGGAAGACACATACACAcACAC
acaacgccaAACAACTATCATACCTATATATCCCCTctaTACCACCACCACCAtcATcgTcaTcAgcgtCTTcaa
CTATCCaagTTCTaACTCAATTCTTCGTCATGCGTCTTCGAaTTCtGACGAAGTCGTCAATAGAAGAATAaaata
attaactcaagatggcAGAAGATAGAATaAAATCAAAATTGCGCCGTCCGGCGTCAATTGAGTCcacgatgTCGA
GCaggactaagccaagacataaaccatctccaatgtcaattctgATGCCACATCTTATgGTTGGAGAATCaTTTC
GTAAATATCGACCaCATGGTAAtacagtagttgagaaagatatttggtaatttgccaaaacagtgcactattttt
agtgtatgtttttaatgcatctccaagatatctAACTTTTCTgcTCATCTTTTTTCTATCATCCCCCTCAAAAAA
CGTTTTGGAGTAACCTGATATCAACAAACGAaATGACACAGCACTCATTTCTgAACTAGAAAAcgAGAAAAGAGC
AACAGCTTTCgactatcaccCAGTGCAAATTTAACTttTTATTTTTATCACTAATTCTTATTCTAatggAAAAAT
CttCAAAaaaTCAattgctaGGGTTTGACCTatcaaatgaagatcCCTATggtgtaTCACATcTTCGGAGGCTaA
GTtCTGGTCGGGAAAAATTTGgAAAAAgtatattatttataacttgATTTTTTTgTTTTCAGGTCTtCgaAACAt
acgGATGaatggtcATTTaGACTGGaaccagctCAGAaaaAGTTTCGAAAAACAGTCAACATTCCACGGAATTTC
ACATGCagctactGCAGATGGAAAATGGAGATGGTaTCTcatcttatattcaattagtaataacctagatatttt
gtTTTCAGGTTCTGGTAcACAGCaTTTACGATATGTCTTCTTGCaCTGCTCATaCAgATATTCTTTCTCATATCA
AAATATCGTCAATAtGGtAAAACGGTCGATCTTGATGTGAGTTagAAGCTTCacctcaataatAACTTTtAAAAA
AATTTTAGCTCAAATTTGAAAACGCTCCATTTCCaTCaATCACAATATGCAATTTaAATCCGTAtAAGAAAAGTG
CAATACAGTCGAATCCtAAtACAAAAGCtATGATGGAAGCaTAcAGTCGACGGATaGGTTCTGGtGAtAAaaCTG
AAGGAATTGCaGCaGCAcTaTCAGCaactGGTGGaCTACATGCtAAAGGTgaattttaagaaactaaatcatgac
AAATTGtttTAAAAAAcctttcacagggtaaagatttttgaaattctaaatataaaaagtcaatatgaaatttca
attgtgcggaaattgcatctaatcttcgaattttctcacacacttccttccaaaaagaattcacactgtttgaaa
atgttttattataaactattcaaattttcttacttttacaataccaAAATTTTCAGTTCGTaGAGCAAAACGAAA
AGCAAAGGGAAAACCAAGGTTACGgGATCGTCGaTATCATCAAGCaTTCGCaCAgTGTCTaTGTGACATTGAACa
gCTAACTGGtGACaGaAAAGGTTCTTGcTTTGCgGCTTTCAAAGGAAAAATAGAaaTCGATACaAATAAtACTGC
TGGTTTTATGAATTTgCATACATCTCGATGTCTTTGTCAACTaGATACggtttctaAAGCACTTTGGCCATGTTT
TCCATGTGAGTTCaTTTTGtacaAATCTagaaagtatgttcacgatTTCAGATTCtTCGTGGAAgGAGAAACTaT
GTTCGGAATGTGTGGATAACACgGGACAcTGTCCAATGAGATTtTAcAAAGGaAATGAacTTTATGAaAATATCA
AaGAgCAAGTtGATtTaTGTCTtTGTCAtAAAGAaTACAAcCATTGTGTTTCtACGaGAGAtGATGGgataatTC
TTGAAATaagcCCaAATGACGAAcTGaatgaTtTGGATATTGGCAAAaaaatcgcatcaCAGTTGAGTGCTCAAC
AGGAAAaacaagccgaagttactactacggaagcaccaacagtgactcaggcgttaggatttgaagaattaactg
atGATATTGCaATtACTTCaCAaGCACAAGAAaATCttATGTTCGCaGTtGGAGAGATGTCaGAaaaaGCgAAGG
AaaGtATGTCCTATGAaTTaGATGAGCTtgTaTTGAAaTGCTCTTTTAATCAaAAAGATTGcCAAATGGATAGGT
atgtattttaatagTCATAAtatatagagaaaattgtTGAAaTTCAGaGAcTTCACgTTgCATTATGATAAcACa
TTTGGAAATTGCTAtACtTTCAAtTAcAATCGAACtGCaGAAGTcgcgtcGCATAGAGCaGGAGCgAAtTATGGt
CTTCGtGTACTGTTATATGCTAATGTTAGTGAgTAtTTACCAACAACTGAAGCtGTCGGaTTTCGGATTACTGTA
CAcGAtAAACACATtGTTCCGTTCCCAGATGCttTTGGTTATTCTGCTCCAACAGGATTtATGTCgTCtTTTGGA
GTtAGAATGGTaAGTTTTgaaattcGAAAATTAtAGAAACTGAtatatataataaagtatggTTTAGAAACAATT
CATaCGtCTcGAACCACCATAcGGACATTGTCGTCACGGAGgAGAagatgcagcgacgtttgtgtaTACTGGTTT
CCAATATTCCGTAGAgGCATGcCATaGaAGTTGTGCTCAGAAAGTGATAGTtGAaGCGTGcGGATGTGCaGATCC
AATGTATCCAgTTGCtGAGATGTTTGGAAataatactAAACCGTGTCAGGCTGTtAATATGGAcCAAAGAGAGTG
cCTCAGaAATACtACActctggTTGGGAGAATTGTATTCaAAAGGAAAAGAAGCaaTcATTCCtGATTGCTACTG
CCATCAgCCTTGCCAGTaAGTtgaaCGtTTTGActcatttacaattctatTATTTtAGAGAgACCAACTATGAAG
TtACaTAtTCATCAGCTCGATGGCCATCaGGaTCCGCAAAGGTTATGGAgTGTtTACCAGGAGACTTTCTtTGCT
TGGAAAAGTATCGAAAGAATGCaGCAATGGTTCAAATaTTCTACGAAGAaTTGAACTATGAAACAATGCAAGAaA
GcCCCGCGTACACtcTcACaTCAGTtCTcGCTGATCTTGGTGGTCTCACAGGTTTATGGATCGGTGCATCagttg
tatcacttcttgaaattgtaactttaatcgtatttgcaacacaagcttatgtcagaaaacggaaagggtgagtcg
atattttttgtttcaaatccctacgttccacctaaaacatcctttgttcacaatctacacttctaatctcatcac
gatactattttgttcatcccaataccctTAGAATAGAGCATGgCCAATAGAAAAAACTAGAGTTGCAcGTTTCGC
ATGGATTCACAgCACACACAACATCACAGATGTCGTGATCCATAtATTGCAGCTCGATtTCGGCCCAATCACATC
ATTCagtacCCGTCCATAGAGCTTCCAGgGttTCATTGAATACTCTTCACAAAAGCAGTACAACtCAAAGTGTcA
AAttaTCTGTGATGGATATTCGATCAATTAAGTCGATCCATTCGAATCATTCGTCGAAAAGCAAACAGTCgATTc
tcaTTGAGGATcTTCCGCCaGCaATtCAGGTAGataattatctcaaatataaaacaagatatatgtaattgcAGG
AgCAAAGTGACGAtgaaGAAGAAACaACaGAATCtTCaaGAACaAAtGGtTCaTGTCGATAtcTGGCgCCTGGaG
AAGATCTTCCgTGTCTTTGcAAgTAtCATCCaGATGGTTCAAtacgaattATGAAAGCaTTaTGTCCcGTaCAtG
GCTAtATGGTTCGTCGAAACTATGACTAcAGGTAGgaTCTTgttttttttcaaaacctaTATTCAAATTCATTCA
ATTCAAGcGTGTCGAAtAGTGAAGAAGAAGACGcaGAAGAcGAaGTTCATCgaGAGCCgGAGCCATTCTATTCTG
CCCCgTATGAGCATCGCAAAAAGTGAGAGAatTAGAGTcAGAAAGAAGAATGGTTTGTTGTGGTACGCACCTTTT
TgtacttgaaaatccatagctagggaatgtttAGATAGATgaaagttacaagaaAGAAGTTTgggtttTTCCTgT
TTTTTTTTTGCACTTCTGTTGAAaTCTATCCTTTCACTTCaTAACACTTTTCCTTgggaaTTCATTTTTCtaaat
aacttctgtaataAAGTTatagcaAAATTCACAAgCAATTTTAGAAGTCAtCCTCACAAAAAATCtgttCAtAAg
AAATCaacaACGGCACTCGATGAaGATCTAGCCATGGAGGCACACAAtGATCCAGAtgGTAATCGACCAGTCTCT
CCAGAAGaACCATAAatcGGTGAATaaagattcccaactcccccaAATCTTAtaTAAATGTACGtTGtATCTCAC
TAAATAtagtttctctcctttTCAAATTTTCACAAACAAAATTGTTCAAGCTTTTCATGTTGctgcTGTCTTTCT
CATTCTCatTGATACAGGTTGTTgatatatAAtTGTTTTCACTGCAATAAATATTGCAAACGTACCTTTGCTACA
TTTTCCATTGTCTCTTTTCCCATCACTTCAAATGGtAATTTGTGcAaTCCATCaTCtCGAAGAAGATAAAgTGCA
ACTacaGGTTGTTTCAGATCttGCTCCCATCTCATTTCTCCTGAAAcAAAATTACatgTTaaTTGAAAatcATTT
TATggatatgaaactaaaTTTAAAATTAaaaaaacaacgtttctatttgatattttataaaccaatatttaacac
atgaactcatgcgAAAAAAGAAacTTTaaattgttgaaaaattcttgacttaatataaataagaaaAGCATTAAA
taattaacgttacatattacccagatgtaaaattttgcgatttttacactacagatactgtacccggcctcgaag
ctaccgaTATTTTtaacccAAAAGatgtgtgtgCCTTTAAggagtactgtatttcaactcctcgtcactgcggag
ttttttttttcaagttttgattccttattcttatttatcgaaaaaaaataagtgaaaattaatggtatcacctca
aattttgaatgagTGAAaacttatgaaacatttaaacgttaaaaattacagtaatccttaaaggcgcaagctttt
ttgtgtttgagaaaagcaatcgcttcaagcccgggcaccgttttttggcgcagaaatcgtaaatttccgaatgtg
ggcagtaatgcaatttgaataattaagaaaaattgaaattcgcctactgaaaaagtctcatcggcgaatagcctc
cgagtttcaagagtttattctgattacgggcaacaaAAAACTTGCcaacagttTATTTTtCAAcaaaaataattt
tttatttattttttcaacaaagataataattttttagctattcacgatttatgtgatcctagcGTTTTCCGTATT
gaTTTTTTGTTggAAATTTgaGCAGgaaaatgTTTTTTtcAATATATTTTtggggaaaaaagtcattttttattt
ggcaattattttttagcttaaatttatatttcaactttctagaaaataactgccttcttcatttttggaacaaat
aatattatttatgtttattctgtttaatttaatattgccacTTACCaGTTTCTcTATCGAAAGTcAGtATATATC
CATGcGAcGAcGATGCATAATGcTTaAATGGCCAcGTATTCACTTCaGGcAaCAAATGgGCAGAATAaTCATTGA
AtGTtGCATTCCAgGTcTTTCCaCGATTCTTtTCATCAAACATAGAgACcCtgTAtTCCGTTCGACCCAAaAAaA
TtGTCTGTTTTTGATTtgcagGGCAGATTCTATCCGCTGAcGCTGAtGAtAGAGTTTCCAcCTGtAAAAATaaAA
TTTTatcagaaatattcaacagtatATATTcAACCTTTAAGCCtGTTTTTGGATCAATTCCAAACCAAACATCTT
TCTTACTTCCtGCGTATAAAATTCCATCATTTCCTTTgCAAGGtGATGCaTGAACTAATTGTGGAATATTGAATG
GAAGTTTTTTCAAaGAACTgTTTTTCAaAACATAAAgtGATCCaTCGAgcggattcggaagaaatgtaaatccct
gtttgacagcagatggagatcgtaaaacaggctctgaaacaaagtaatgTGAATTTTcAAAAcTTAAATTTAAAA
AAttAAACCTTCTTGcAAtGTCCATTTTATtTCTCCcGTCtctGaaTCCAAaGCTCTcaAACGtCCATCaATTGT
cgaaacaagtatagttgaagatgttttctcttcgtcgtctcctattgattcgtgatcctgaacaacGAAAAATAA
TGAAATTTTgTTTTTtgtagtacagAAACTcaCATTccGGAAGCCaGGtGTGCtaaTACAAATTaCAGAgGaGAA
GAGCAGCAAaAAAATaaATGTGaAtAGATGAAatgttgctcTCATTTcaattgcgaaTTATTTTCGaCGcCaAaa
AATCTCCATGAAGACGaGAGCgGGGTTGCTtAGCTGCAAAAACaGAAAAtcAATagagagggtttcacCAAgTGT
TCCACATATTCAAATTTTgcataAAACAACgCGATTGCGAAATTATAaTATTTGTTTTGTtaccaaaacggcgAT
AATAATGTgTGTGtgcgAAATAAGcCAACGTAATAAatggaagGGaTACGGTGCACAaGTACGCAAgtACACgct
gatCCCaAAATGCAGAcatttgtcaaccgtactccagccagccggctgcgaactttttttgaatttttaaacTTT
TCCTTTTTTAgTTTctttttttCACAATtcattcgatcagatcttttttatgttcccagagctcgattcgccttt
tattattcagaataatcatttctcaatcatttgcctcctatttaatttcatgaaaatttcagccttagagtgaaa
gtctttctttcagaaacgataaagttttactaaatcagttttgagaatctaacttgcttaatttctcgttgcaaa
tagcatggaattgtttagaaatatttcgcgcatagaaatgcatattcaaatttgatattggagtggtaaattttt
tgaactcattcagctcattctagctcaccatcatttactttctgtgtctaacttaagatttgatatttttcattt
gttttctaaaAAAACCGATCTGAATGCACTTTTAAGcAATTTTCAACcgattccgaTGTTTGTGTTGACGTTGAC
GTCGACTGACAAACAAATCGgCGAAAAAAGTCAATTTCGATGGGTCGCCAGTGCTGAGAAATCGGAGAGAgaaGA
AGGAGAGTATGCACTTTTGCTGTACGCAAACTTTCTTTTTTTGAAGAGAaaaaGACAtCAgTTTGACAAtCCACT
TGGTCTCACGAAACTGTTTTCACGCCTCTatcCTTTTTTTGCAgAAAAtgcactCAAAGAATGTACATTCtataa
accaacgtttttgtagactttgaaaatacagaccattttcatcagaaattcacatcggttctgagtatattccat
agttgacgacaaatataaacattttccattttctctttatcagacctcaacaaaaattgccttccgtttttacgg
tatgactgtgtatggcttccggttcaactttgttcaatacgttttccacatgcttcaaactttttcagtacttca
caacaaaacagtattgaatttattttcttcaggtctatattttcattttttgaactttataaaagtggtaccatt
gaacaTGCACTGTTTGACCTTTTGCTCcttcacatcagTGATATTTTATGCTTCTTCTtctctcttccatcaTTC
TTCCGATTCATCACCAgGAGaaTTCTCTTTTTTGCAGaCGCCgCTGCTGCGACACGGACACGTATGCGCATGCGC
TCAACTCTCTGcCGTCTCTGCTTTTtgTATTaTTTTttcgtctcgcctcttCCtCGCTTCGTCCTATCGATTCAT
CTATCGGTGGTGCCCTtGCtGTGTCGCCGCGTCGCCAcggccaTTTTTTGtAGTGTCCCTTttacgCTCCCaGCG
CTCACCCCCAGTCACaTcTTCTttgctcagcagttcttcttaaagaacgttagagttctctagaggtgcaagatt
ttaacatcgggctcttctttcaaattttgtgggctctgcttcaattttcctgccgaagcacatgaaaaacaacta
gtcagctatacatttcaatgtttgcgtacgaatcttttgaacacaaaaacgaattaatttcagatattgttgacc
cttttccgccaaaatagccgctctttttcgtGCCCACCTCATtctttttCTGCTCtttGGAGCCATGGCACGATC
ATCTCTGgATTGCAAAATTGCAATATCTTTTAACATCACACTCacCTTCCActAgGATaATCTCcatTCGGCGCA
ACTGCCACTGCTCTAAGCTATCCGATTTCAAAAAGAGGTCAGCTGTGGTGTGTACAAGCAGAAATTATCATTTCC
GTTCTTcacatcacagctagtttcctatttttgtTGATAACCtCAcTGGCTCCaTCTTTCAATAGTTACGGTTTG
TGTATAAcccCGTGTGATCAAtAAACCACGATTGTAAATCAACtgaCTGtTCTTCCTCATtgTCAATCAgATCca
CaATCTGGATACGGAATAAAGGGTATTCCCCGTctgtatgcagattgatatacgtttcggttgtctaactcacta
ttctttttaattttctctgtcccttccaaaacgctgtaatacaatattttaaagaaaagttTAAAGTTCtaAAAT
aTTTCTcatattGAAAGTGCAAAAAACTTGTTTttacatgactgtcacctttTGGCCagtCATGTCCTgagtAAG
AACAAAGGgTCATTTATcGGGCCATCTATGCGCcgcacatcGCACaTTCATCAATagTATagCTCTTCGCAACAT
GTaggATGATGCACTTTCGATATAGACACTAATTGTCGTCGTGTTGGTTATCAcAATtCGCTctTATCATTcata
aACCCAttcATTATCTTTGACTGCAAcacACTCGTtACAGGTGTGTACAATTCGCAACATTTTTGGGTAGTGAGA
GCACtgacttGGCCGTGATAACAGAAGAGAAGTGTGTTATTTGTATGCGCACCACTCAACTCATCTTctttCCCc
CTCGTTTCTCCCCCGAGCGGcAGTAGGTCCAATAAGATTGTTGCACTTTTGGAATTGGTCATCTCTtTTGTAgct
tgcatttgtatttctctgatccctctattcggaaaaaaagtattgcttaaattatttctgaagtttgtaactgtt
tgttttcagatttaaatagaaaattttatttcactagattttgtagtgcctaaaggcgcacggatttattcagat
aggtctcggcgcgcataaaagtttatggtattttttcgaaatctgagttttgaaaactgatttttaactgttttt
cacagagttattaaaa

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Enhanced BLAT Score Card

 (Back to Top)


 Nematode EvoPrinterHD  -  Generate EvoPrint and EvoDifferences Profile


  
 Gene Name: unc-105 locus
        

     Reference Genome: C.elegans
    



 Click on individual Species and Composite eBLATs to
view eBLAT alignments.



  
    
      Score
    
     =  
    
    
      Total number of aligning bases.
    
  
  
   
     Start/End
   
    =  
   
   
     First and last aligning bases in reference sequence.
   
  
  
    
      Ns
    
     =  
    
    
      # of Sequence gap(s).
    
  


 
View test species eBLAT to identify gap(s).








  
    
      R/D
    
     =  
    
    
       Sequence rearrangements and/or duplications.
    
  
  
    
        R
    
    
      =  
    
    
      Total # of aligning bases unique to the 2^nd or 3^rd eBLAT
    
  
  
    
        D
    
    
      =  
    
    
      Total # of common aligning bases
    
  
  
    
      Red
    
    
      =  
    
    
       Common to 1^st, 2^nd  and 3^rd eBLATs
    
  
  
    
      Brown
    
    
      =  
    
    
      Common to the 1^st and 2^nd eBLATs
    
  
  
    
      Magenta
    
    
      =  
    
    
      Common to the 1^st and 3^rd eBLATs
    
  






 
    
         
            
              C.elegans
              (Ref  Sequence)
         
             Score
             Start
             End
             Ns
             R/D
        
  
           
            15691
            1
            15691 0 308 
  
           
            333
            11108
            15668 0 
                 0 /
                 25
               
  
           
            356
            11055
            15668 0 
                 0 /
                 48
               
 
               
               
                 All Alignments
               
                 1^st
               
                 None
               
           
   


    
    
         
            
              C.remanei
         
             Score
             Start
             End
             Ns
             R/D
        
  
           
            7091
            951
            15447 1 22 
  
           
            146
            3969
            12540 0 
                 69 /
                 16
               
  
           
            122
            3969
            11675 0 
                 54 /
                 7
               
 
               
               
                 All Alignments
               
                 1^st
               
                 None
               
           
   


    
    
         
            
              C.briggsae
         
             Score
             Start
             End
             Ns
             R/D
        
  
           
            4856
            572
            15447 5  
  
           
            403
            4921
            6218 1 
                 403 /
                 0
               
  
           
            198
            7335
            11214 0 
                 192 /
                 6
               
 
               
               
                 All Alignments
               
                 1^st
               
                 None
               
           
   


    
    
         
            
              C.brenneri
         
             Score
             Start
             End
             Ns
             R/D
        
  
           
            2884
            6591
            15436 1  
  
           
            1838
            1216
            7699 1 
                 504 /
                 410
               
  
           
            1088
            1357
            6397 2 
                 164 /
                 0
               
 
               
               
                 All Alignments
               
                 1^st
               
                 None
               
           
   


    
  
  
    
         
            
              P.pacificus
         
             Score
             Start
             End
             Ns
             R/D
        
  
           
            122
            3210
            13081 0  
  
           
            136
            5042
            13604 0 
                 136 /
                 0
               
  
           
            103
            11306
            12667 0 
                 85 /
                 18
               
 
               
               
                 All Alignments
               
                 1^st
               
                 None
C.elegans unc-105 locus Genomic EvoPrint (Back to Top)
Black capital letters represent bases in the C.elegans unc-105 locus reference sequence that are conserved in the C.remanei and C.brenneri orthologous DNAs. Reference genome repeat sequences: Blue underlining indicates single-copy repeats and Red underlining identifies multi-copy repeats.
Nematode EvoPrinterHD - EvoPrint and EvoDifferences Profile

C.elegans unc-105 locus Genomic EvoPrint (Back to Top)

Black capital letters represent bases in the C.elegans unc-105 locus reference sequence that are conserved in the C.remanei and C.brenneri orthologous DNAs. Reference genome repeat sequences: Blue underlining indicates single-copy repeats and Red underlining identifies multi-copy repeats.

unc-105 locus Genomic Evodifferences Profile - Relaxed EvoPrint (Back to Top)

Black capital letters represent bases conserved in all species and colored bases represent sequences present in all species except C.remanei or C.brenneri.Reference genome repeat sequences: Blue underlining indicates single-copy repeats and Red underlining identifies multi-copy repeats.

Enhanced BLAT Score Card (Back to Top)

Nematode EvoPrinterHD - Generate EvoPrint and EvoDifferences Profile

Black capital letters represent bases in the C.elegans unc-105 locus reference sequence that are conserved in the C.remanei and C.brenneri orthologous DNAs.

Reference genome repeat sequences: Blue underlining indicates single-copy repeats and Red underlining identifies multi-copy repeats.

Black capital letters represent bases conserved in all species and colored bases represent sequences present in all species except C.remanei or C.brenneri.

Reference genome repeat sequences: Blue underlining indicates single-copy repeats and Red underlining identifies multi-copy repeats.
