Nematode EvoPrinterHD - EvoPrint and EvoDifferences Profile

Conserved Sequence Parsing Instructions
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Conserved Sequence Block Name:
 


C.elegans unc-105 locus Genomic EvoPrint  (Back to Top)

Black capital letters represent bases in the C.elegans unc-105 locus reference sequence that are conserved in the C.remanei and C.brenneri orthologous DNAs.

Reference genome repeat sequences: Blue underlining indicates single-copy repeats and Red underlining identifies multi-copy repeats.

(ORF orientation in 5' --> 3' direction)
gttttcagcttcagctcccctcccccaaaaacttgtgaaaacgaaaaaattcaatttcctgtatttaatctacaa
ttttattgtcgagaattacacaaaaaaatgacgaccagtatcgaaaaatcgagttatcacaagttaccgtacgat
atatgaagggagtgcattcataggaaatgcagaaaaagaaacgggatcataattcgacaaaaatgggtaggtagg
cgaggagagatccgaaaaaacattaaaggataaacacagaggaaacatgaggacaagaccattggacagaaatcc
cagaataatgataataaatttacacacgcaaacacatcgtcgatgttcttcaaacggcaaaaacggcacttcgaa
aagctttgttaaatgattgataactgattctaaaacccagaaacttggtatataataattattggttaaatccaa
ctattctcactacttgcagagtgattaatcggtgttcggatttgatttctttttgatattcctcttatccaattt
tagaggagttcgttgctcgacaggttttggtgctcgtgcccacacctcatttgccatttcttctttaatcttctt
tcttactctctcttcttcttccacaattggatacattcgagcacgaaccttaaatgtttaatttatagagttgtc
caaaattagagaggaattcttacatcatcggaatagtatcttttgaagacagcctctccggaacaatactcggtt
gctttgtaaacatgaagtaatagctgaaaaatattaggatcaaaataaacaatttaaaattaatagaaactcacc
cgagggaagcgtgatgtaaaataatgcaagaactgatctggaatgtctccaagagattgtctgacatcttctggt
aattctctatagtgatgcttcttgttacgcattgctcttagcaaatctcgaactgaaaatgatttgtatgttctg
aactttcttaaatcttccttcaaagcatcacaaatcttctccctccatccaccgcatacaactattcgagcatct
gtttctattcttctcacaactggactattgtcttcttctttctctacacgatcagatacatccgaaaaatatgct
aatcgcttttcagatgtccagaaaaatggatgattcaagacggcatcagcggtcaatcggtgcaatggctccacg
ttcagcattgaagagatcAAGTCATCaGCcAAcGACCAATCtgcaaaaacactgttatgtgagtaatttccaaaa
ttctatttcttaccatccaaatctgccaatttattcaatgtgtattctccatttacaatatttgcttgtctgtgc
aatgatTTTCCAAAaGGATGaGTaCCcGagGttAacACATAATAGAAAATACATCCaAGtGAGAAGATATCaACt
GGATAaGAaGTaCTtGCaGAaATaAgaACTTCtGGAGCAATCCAgCCATCggttcctgctaatccagacgcaata
CCTCTtGAaATtGAaTTcTTTCCaGGTTGaACcCtTTTACAAAgaccaAAATCtGAGATgACTGCtCtCATTTct
CCtCGCTGaCTaGCcaTTGTaATtAgaACATTtTGTGGcTTCATATCTCgATGcACaATTTTtGAaGCATGaAGa
TGTGCcAatCCATCgGTTGcctgtttcataatgtctcgtagagcaattgtaacattttgttgaacctctTTCtGC
TCaACAtAATCATTCAAaGAaGCtATgCAaAGtTCGAGtGCCAAATAtcgaAAtTGaCTGTCtGATTCCATaCAa
AAGTAtCtGATaACgTGtGGATGTGTatcactttctcgtaataaatccgcttctctgtgagcaaacttcacgaat
tctgaaactactctctttacagcaacttctcttccatcaaaagttcctctataaaccacagttccttcacatcct
gttccaagaatatctgatggactatacatcaacttgctaccaaCtGCCATCCAAcCctcgggaatttcaattttt
ctattcgcCCaTCCAAAgCTTCCacgaTTCgattgTTTtGAtgTcTGagCACTTCtagattctccgggattgttt
acaatttcgaaggaaTCCaTTCttgacgtcgacttctgttGATCCCATTGTCTTCCACATTGCCAaattacagtt
aatagtaatgcaaacatcgtaaccagtgtagcatagaatggaataggatgattattgagtagaagcagaatgaaa
gatgtgtcctcatgcttctgtggctcaacaggtcccagaagttgtggtggaggccgttcaattgtagatccaatt
gccttatgaggtccaggaactggatatcttgtcggaataatcgttgccatcgtcatcaTTGGtCGAtcatgatat
cctgcaaaaaattagtgaaatattatatcacacttcccctctttcttccgtcattcctcaattcacccatcacct
tgaaactctcgaacagtgaaagaatttcgacaaaaagagagaaaaggtgggaggagaagttaggaacaaaagaga
gatagaagcacatacaaacgaaaaattccgctgctcttcgcactctctttttttctcgcggtgagtgcgaaattt
tgcagaatgagatttgagagctcacctaataataagtattctccatccgaagttttatgagtaattgatggagga
atatttcgaattattggtctccgtggtggcaagtactcttctttttccatttctgtaagtgcaattggagctgga
ccttctagaagtggtggaccaagaagttttggagaatatgtaatggtttggtgatcgactagagcttcgatagca
taaagtccaaatgaagattctccaacgaataaagctgggaagaattgattcgtgagggatgttgtttgaggatct
gcagcattgacacccaaaactgttggccattgatccacggtgaagatattctgagaaaaaagagcatagatgaat
gtatttctgatcagTGACAAATTCTttgcGATATTATGATaTTTCccacactaaatGTCAATCTTTTGTCATCcC
TTTTaacctacaaacatttacaaaaaaaataaaAAGAGggaAgAGAGAAATCAGAAGCTCAACGAGCCTCCTCGG
GGcGTCATCAACCACCACCTCAGCTGTGTCCAACTGTTGCgTCTtcctgtcggctctcgAATACCTcTGGTtagt
ccgtggatcgcctCTCACACATTCAACAcatacataTACACACACAgatagAAAAAGATACATGGaTgagatgtg
caggAGTGGACGTGtcgatggtgGTGTCCTgcctccatcggtcgaagagccaagcttccagaatgaagaaaagag
cttGAAACGTAAAATATGATGAATTACgttTATGATTTcttccctctcaatctaccttcatttcatttttctttg
tttattactttagtgtgaaatcttttaaataatattataaaaaattagaataccttttaactttggtaatgtttt
agatataaactatatttcatttacaccttaacaaaaaagaaaatcattagtcaaaaacttcgacattacagtacc
atcattacctaagcttgatcttctgattccacctagacaccagtgatcagaagcgaaaccccattatgtttttct
taacattttcattttgaagacttctttactaccagtgtgatgagatctttgatataaataattagaattctataa
attcttggtatttctaccgtacactctatttagagcctacaaaaaataatgatacttgaaaatcaaacttaacac
caatgttattatatcttcacaataatgttctaagttcatttttacagtttccggattactgtagttggaatataa
tatactgaataataagaaatgtaccaatatattgtttacaatatttttgtgagaactgaaaattgaatTTTTTTT
TTAATTTaaaaatttctatatcatttcaagagaatgataaagtatgacttattattaatattaaaaaacgcattt
ccaccactgttcccttcgaatctttcatttgctttttgtttCTctcTTTTTCAttcctCTAttATAtCATCACAa
gcatTGCACTCaGAAGCcATTtATCACAATaTCTCatGTGTGtaTGTGtgtgtgtgtcagaagagactcctcgcc
caaTTGAATCAAATCAAATtGCAATTAGTCTTtTTCTttatcattcaaatgacatgctaattttttcagacaaaa
cgtgccaatgggagcATGGAGAATGcGTCGTCAACTgcccAgcTaTCGATAGAtatCGAaGAtaatggacaggca
gcacagttaccaccacagccacctagtAGgCAtCAtcAATGGGCtCAgGATCAaAATCGaAAgAATATGTCaTTT
GAGAAatcaggacacggtaaaataatttggtgatgatgaaaatataagttttaaccgtaaatctagaggttattc
aaatattaaggattactgtagatatatttgagttgaagaataatatctaatgatatagtaattaaaagttagaaa
aacaacatttcttataaacaaaatgttttttttgcgtttaacttcatattttcagcaacacgaaatgcttcagaa
gacagtaagaacatcagatttcttggagaccatgctccgcccagtggagctcgaaaaagatctcataacaaacgg
ttacacgactggagacggcgactgtcagtcaatccagaattactgagaaggcatggtaagatctacttattaaaa
tacacacctggtcataggaatctcatagattaagatgcaactagattcgcaccgccggtgtcgggcagcctccgt
tttattagtttttgcttttttcaccgaaaaagaaatagaagcatgaaaaagttatgacgaagagcgaggcgcaag
agttcttcttcgctctagaacaaaagacaaCaGAGGGCAGGCATTTTcTTGTGGCtgtgaTTCaCTTCTCACTTC
ATACAtCATTttGTCgtCtactaagacaagtatccagcatctaggaatgctgcatcttgcagcttctagaaattc
tcagattaattctagtaagctttccatattcccccaacatgataagtttttgctcaaactctctaatctttcgga
ataacaacgtttgagcacaccttcaaatattcaagtatacagtaagataatctatgaactttatacataaaggaa
actactttaaaacaaagattgaacaccaacatgggattaaaagtacatttccaccttcgctttcatctcttactc
ccccatttcaactaTCTTCGTATCGAACCCGTATAGATCATTGgATCTCTctatatccctcttttatctgagctc
cagagaaaaatctctcaccaatcagcacttgacgatgtaccCTCTAtAACACCATCGGCGGgCAACAAATCAACC
CGAACAACatgaagtgaaaggagtgagcaTACACGGATCATCagccgctgtgaagaaagtgggagacatgatCAT
GTCTGCGgactctcgttgaatgggctctatggtcttgatttTTTTATTTCTTTTTAACTGCTCAATCAACACATT
CTTacgatacttactacattctcacaaagatacttatcgaaagaatagtgtagaactgaaaaagaagaagaaaat
taagtttttggaacttctatctgaatgttgaaccactacaacaatcagtatcagttgcaagaagaagcacaagag
aaaatgtgacacttacaattcgttcaaatcaatcaaaatcagaactttctagagctcaaattttttactttgatt
taaaaattgtctgtctttatcgtctctaatttcaacaaacctctcccaattgtcgctgctcctctcttcggtggt
aggggcccctgtgatgctgtgccccgagtctaagaacaccactttttctctactattacacattcttcctacccc
tccattgcggcactCATTCCaATCCAATCAGACAGATATTTTGTCACaCGAGACgGAAGACACAtACACAcacac
acaacgccaaACAACTATCataCCTaTATATCccctctataccaccACCACCAtcatcgtcatcagcgtcttcaa
ctatccaagtTCTaactCAATTCTTCGTCATGCGTCTTCGaatTctGaCGAaGTCGtCAATAGAAGAAtaaaata
attaactcaagatggcAGAAGAtagaataaaatcAAAaTtgCGCCGTCCGGCGTCaATtGAgtccacgatgtcga
gcaggactaagccaagacataaaccatctccaatgtcaattctgATGCCaCATcTTATgGTtGGAgAaTCaTTTC
GtAAATATCGACCaCaTGGTAAtacagtagttgagaaagatatttggtaatttgccaaaacagtgcactattttt
agtgtatgtttttaatgcatctccaagatatctaacttttctgctcatcttttttctATCatCCCcctcAAAAAa
cGTTTTggAGTAACCTGATATCAACAAACGAaATGACAcAgcactcatttctgaactagaaaacgAGAAAAGAGC
AACAgcTTTcgactatcaccCAGTGCAAaTTtaactttttatttttatCaCTAATtcttATTCTaatggaAAAAT
cttcaaaaaatcaattgctagggtttgacctatcaaatgaagatccctatggtgtatcacatcttcggaggctaa
gttctggtcgggaaaaatttggaaaaagtatattatttataacttgatttttttgttttcaggtcttcgaaacat
acggatgaatggtcatttagactggaaccagctcagaaaaagtTTCGAAAAACAGTCaACATTcCAcGGAATtTC
ACATGCagctactgcagatggAAAaTGGAGATggtatctcatcttatattcaattagtaataacctagatatttt
gttttcaGGTTcTGGTAcAcAGCatTTACGATATGTCTTCTtgcactgCTCATaCAgATATTCTTTcTcATaTcA
AAATATCGtCAATAtGGtAAAACgGTcGATCTTGATGTgagttagaAGCTTcacctcaataataacttttaaaAA
AATTTTAGCTCAAATTtGAAAAcGCTCCATTTCCaTCaATcACAATATGCAATTTaAATCCgTAtAAGAAaAGTG
CaATACAgTCGAATCCtAAtACAAAAGCtATGATGGAagcatacagtcgacggataggttctggtgataaaactg
aaggaattgcagcagcactatcagcaactggtggactacatgctaaaggtgaattttaagaaactaaatcatgac
aaattgttttaaaaaacctttcacagggtaaagatttttgaaattctaaatataaaaagtcaatatgaaatttca
attgtgcggaaattgcatctaatcttcgaattttctcacacacttccttccaaaaagaattcacactgtttgaaa
atgttttattataaactattcaaattttcttacttttacaataccaaaattTTCAGTTCGTagaGCAAAAcGAAA
AGCAAAgGGAAAaCCaaGgTTACGgGAtCGTCGaTAtCAtCAAGCaTTcgcacagTGtCTaTGTGAcATTGAACa
gcTaACtggtgacagaAAAGGtTCtTGcTTTGCgGCTTTCAAAGGAAAAATAGAaaTcGAtacaaataatactgc
tggttttATGAATtTgcatACatCTCGATGTCTTTGTCAAcTaGATACggtttctaaagcactttggCCATGTTT
TCCaTGTgAGTTcaTTTTgtacaaatctagaaagtatgttcacgatttcagattcttcgtggaaggagaaactat
gttcggaatgtgtggataacacgggacactgtccaatgagattttacaaaggaaatgaactttatgaaaatatca
aagagcaagttgatttatgtctttgtcataaagaatacaaccattgtgtttctacgagagatgatgggataattc
ttgaaataagcccaaatgacgaactgaatgatttggatattggcaaaaaaatcgcatcacagttgagtgctcaac
aggaaaaacaagccgaagttactactacggaagcaccaacagtgactcaggcgttaggatttgaagaattaactg
atgatattgcaattacttcacaagcacaagaaaatcttatgttcgcagttggagagatgtcagaaaaagcgaagg
aaagtatgtcctatgaattagatgagcttgtattgaaatgctcttttaatcaaaaagattgccaaatggataggt
atgtattttaatagtcataatatatagagaaaattgttgaaattcagagacttcacgttgcattatgataacaca
tttggaaattgctatactttcaattacaatcgaactgcagaagtcgcgtcgcatagagcaggagcgaattatggt
cttcgtgtactgttaTATGCtAATGTtAGTGAgtatttaCCAACAACtGAaGCtGtcggatTTcGGATtACtGTA
CAcGAtAAACAcATtgttccgTTCCCaGATGCttTTGGTTAtTCtGCtCCAACaGGATTtATGTCgTCtTTTGGA
GTtaGAATGgtaagttttgaaattcgaaaattatagaaactgatatatataataaagtatggtttagaaacaatt
catacgtctcgaaccaccatacGGaCATTGtCGtCAcGGAGgagaagatgcagcgacgtttgtgtatacTGGtTT
CcAaTATTCcGTaGAgGCaTGcCATaGaAGTTGTGCTCAGAAaGTGATagTtGAagCgTGcGGATGTGCaGATCC
AATGTATCCagTtGCtGAgATGTtTGGAAataatactaAACCgTGtCAGGCTGTtAATATGGAcCaaAGAGAgtg
cctcagaaatactacactctggtTgGGAGAaTTGTAttcaAAAGGAaaagaagcaatcATTCCtGATTGcTAcTG
cCATCAgCCtTGCCAGtaagttgaacgttttgactcatttacaattctattattttagagagaccaactatgaag
ttacatattcatcaGCtCGATGGCCaTCaGGaTCcGCAAAggTtATGGAgTGTtTACCaGGAGAcTTTctttgct
tggAaAAgTAtCGaAAGAAtGCaGCaATGGTTCAaatattcTACGAaGAaTTGAACTAtGAAACAATGCAAGAaa
gccCCGCgTACACtcTcACaTCAGTtCTcGCtGATCTTGGTGGTCTcACaGGtTTaTGGATcGGtgcatcagttg
tatcacttcttgaaattgtaactttaatcgtatttgcaacacaagcttatgtcagaaaacggaaagggtgagtcg
atattttttgtttcaaatccctacgttccacctaaaacatcctttgttcacaatctacacttctaatctcatcac
gatactattttgttcatcccaatacccttagaatagagcatggccaatAgAAAAAACtagagtTGCAcGTTTcGC
ATGGATTCACagcacacacaACATCACagatGTcGTGATCCATAtATTGCAGCTCgAttTCGGCCCAATCacaTC
ATTCagtacccgtccataGAGCTTCCAGgGttTCAtTgaataCtCTtcaCAAaAGCAgtACaActcaAAGTGTca
aattatctgtgatgGATATtCGATCaattaagTCGaTCcAtTCGAATCATTCGTCGAAaAGcAaacagtcgattc
tcattgaggatcttccgccagcaattcaggtagataattatctcaaatataaaacaagatatatgtaattgcagg
agcaaagtgacgatgaagaagaaacaacagaatcttcaagaacaaatggttcatgtcgatatctggcgcctggag
aagatcttccgtgtctttgcaagtatcatccagatggttcaatacgaattatgaaagcattatgtcccgtacatg
gctatatggttcgtcgaaactatgactacaggtaggatcttgttttttttcaaaacctatattcaaattcattca
attcaagcgtgtcgaatagtgaagaagaagacgcagaagacgaaGTTCATCgagagCCgGAGCCattctATtCtg
CcCCgTAtGagCATCGcAAAAAGTGAGAGaattagagtcAGAaAGAaGAATGGTTTGTTGTGGTACGCACCTTTT
Tgtacttgaaaatccatagctagggaatgtttagatagatgaaagttacaagaaagaagtttgggtttttcctgt
tttTTTTTTGCaCTTCTGTTgaaatctaTCCTttcacttcataacacttttccttgggaattcatttttctaaat
aacttctgtaataaagttatagcaaaattcacaagcAATtTTAGAAGTCAtccTCaCAAAAAAtctgttcataag
aaatcaacaacggcactcgatgaaGATCTaGCCATGGAgGCaCAcaAtGATCCagatggtaatCGaCCAGTcTCT
CCAGAagaaccataaatcggtgaataaagattcccaactcccccaaatcttatataaatgtacgttgtatctcac
taaatatagtttctctccttttcaaattttcacaaacaaaattgttcaagcttTTCAtGTTGctgcTGTCTTTCT
CATTcTCatTGATACaGGTTgttgatatataattgTTTTcaCtGCAATAAATATTGCaaacgTACCTTTGCtACA
TTtTCCAtTGTCTCttttCCCATcACTTCaAatggtaatTTGTGcAatCCATCatctcgaagaagataaagtgca
actacaGGTTGTTTcagatcttGCTCCCAtctCATTTCTCCTGAAAcAAAAttacatgttaattgaaaatcattt
tatggatatgaaactaaatttaaaattaaaaaaacaacgtttctatttgatattttataaaccaatatttaacac
atgaactcatgcgaaaaaagaaactttaaattgttgaaaaattcttgacttaatataaataagaaaagcattaaa
taattaacgttacatattacccagatgtaaaattttgcgatttttacactacagatactgtacccggcctcgaag
ctaccgatatttttaacccaaaagatgtgtgtgcctttaaggagtactgtatttcaactcctcgtcactgcggag
ttttttttttcaagttttgattccttattcttatttatcgaaaaaaaataagtgaaaattaatggtatcacctca
aattttgaatgagtgaaaacttatgaaacatttaaacgttaaaaattacagtaatccttaaaggcgcaagctttt
ttgtgtttgagaaaagcaatcgcttcaagcccgggcaccgttttttggcgcagaaatcgtaaatttccgaatgtg
ggcagtaatgcaatttgaataattaagaaaaattgaaattcgcctactgaaaaagtctcatcggcgaatagcctc
cgagtttcaagagtttattctgattacgggcaacaaaaaacttgccaacagtttatttttcaacaaaaataattt
tttatttattttttcaacaaagataataattttttagctattcacgatttatgtgatcctagcgttttccgtatt
gattttttgttggaaatttgagcaggaaaatgtttttttcaatatatttttggggaaaaaagtcattttttattt
ggcaattattttttagcttaaatttatatttcaactttctagaaaataactgccttcttcatttttggaacaaat
aatattatttatgtttattctgtttaatttaatattgccacttaccagtttctctatcgaaagtcagtatatatc
catgcgacgacgatgcataatgcttaaatggccacgtattcacttcaggcaacaaatgggcagaataatcattga
atgttgcattccaggtctttccacgattcttttcatcaaacatagagaccctgtattccGTTCGACCcAaaaaaa
ttGTctGTTttTGATTtgcagggcagattctATCcGctgacGCtGAtGatAGAGTTTCCacCTGtaAAaataaaa
ttttatcagaaatattcaacagtatatattcaaccTTTAAgCCtGTttTtGGATCAATtccaaacCAaACatctT
TCTTaCTTCCtGCgTAtAAaAtTCCatCaTTTCCTTtgCAAGGtGAtGCaTGAACtaattgtGGaATAtTGAAtG
GAAGTTTTTTCAaaGAACTgtTTTTCAaaacataaagtgatccatcgagcggattcggaagaaatgtaaatccct
gtttgacagcagatggagatcgtaaaacaggctctgaaacaaagtaatgtgaattttcaAAActtAAAtttAAAA
AAttaAACCTTCTtgcaatgtccattttatttctcccgtctctgaatccaaagctctcaaacgtccatcaattgt
cgaaacaagtatagttgaagatgttttctcttcgtcgtctcctattgattcgtgatcctgaacaacgaaaaataa
tgaaattttgttttttgtagtacagaaactcacattccggaagccaggtgtgctaatacaaattacagaggagaa
gagcagcaaaaaaataaatgtgaatagatgaaatgttgctctcatttcaattgcgaattattttcgacgccaaaa
aatctccatgaagacgagagcggggttgcttagctgcaaaaacagaaaatcaatagagagggtttcaccaagtgT
TCcacaTATTCAaattttgcataaaacaAcgCGATTGCGAAATTataataTTTGTTttgttaccaaaacggcgAt
AATAATGTgTGTGtgcgaaatAagcCAACGTaataaatggaagggaTACGGTGcacaagtacgcaagtacacgct
gatcccaaaatgcagacatttgtcaaccgtactccagccagccggctgcgaactttttttgaatttttaaacttt
tccttttttagtttctttttttcacaattcattcgatcagatcttttttatgttcccagagctcgattcgccttt
tattattcagaataatcatttctcaatcatttgcctcctatttaatttcatgaaaatttcagccttagagtgaaa
gtctttctttcagaaacgataaagttttactaaatcagttttgagaatctaacttgcttaatttctcgttgcaaa
tagcatggaattgtttagaaatatttcgcgcatagaaatgcatattcaaatttgatattggagtggtaaattttt
tgaactcattcagctcattctagctcaccatcatttactttctgtgtctaacttaagatttgatatttttcattt
gttttctaaaaAAACCGATCTGAATGCACTTTTAagcaattttcaaccgattccgatGTTTgTGtTGAcGTTgAC
GtcGaCTGaCAAACAAATCGgcgAAAAAAgtcaatttCGATGggTCGcCAGTGCTGAGAAATCGgagagagaaga
aggagagTATGCACTTTTgctgTACGCAAACTTTCTTTTTTtGaagagaaaaagacatcagtttgacaatccact
tggtctcacgaaactgtTTTCACGCCTCTatcctttttttgcagaaaatgcactcaAAGAATGTACAttctataa
accaacgtttttgtagactttgaaaatacagaccattttcatcagaaattcacatcggttctgagtatattccat
agttgacgacaaatataaacattttccattttctctttatcagacctcaacaaaaattgccttccgtttttacgg
tatgactgtgtatggcttccggttcaactttgttcaatacgttttccacatgcttcaaactttttcagtacttca
caacaaaacagtattgaatttattttcttcaggtctatattttcattttttgaactttataaaagtggtaccatt
gaacatgcactGTTTGACCTTTTGCtccttcacatcagTGATATTTtATGcttcttcttctctcttccatcattC
TTCCGATTCATCACcaggagaattcTCTTTTttGCAgaCGCCgctgctgcgacacgGACACGTATGCGCATGCGC
TCAACTCTCTGccGTCTCTgCtttttgtattattttttcgtctcgcctcttCCtCGCTTCGTCCTATCGATTCAT
CtATCGgtGGTGCCCTtGCtgTGTCGcCGCGtCGCCacggccaTTTTTTgtagTGTCCCttttacgctcccagCG
CTCACCCCCAGTCacatcttctttgctcagcagttcttcttaaagaacgttagagttctctagaggtgcaagatt
ttaacatcgggctcttctttcaaattttgtgggctctgcttcaattttcctgccgaagcacatgaaaaacaacta
gtcagctatacatttcaatgtttgcgtacgaatcttttgaacacaaaaacgaattaatttcagatattgttgacc
cttttccgccaaaatagccgctctttttcgtgcccacctcattctttttctgctctttGGAGCCATGGCACGATC
ATCTCtggATTGCAAAATTGCAATATCTTTtAACAtCACaCtcaccttccactaggataatctccattcggcgCA
ACTGCCactgCtCtAAGCTATCCGATTTCAAAAAGAGGTCAGCTGTGGTGtGTAcaagcagaAATTATCATTTCC
GTTCTtcacatcacagctagtttcctatttttgtTGATAACCtcacTGGCTCCatCTtTCAATaGTTACGGTTTg
TgTATaacccCGTGTGATCAAtAAACCAcgaTTGTAAATCAactgactgtTCTTCCTCattgTCAATCAgatcca
caatcTGgATACggAATAAaGGGTATTCCCCgtctgtatgcagattgatatacgtttcggttgtctaactcacta
ttctttttaattttctctgtcccttccaaaacgctgtaatacaatattttaaagaaaagtttaaagttctaaaat
atttctcatattgAAAGTGCAAAAAACtTGTTTttacatgactgtcaccttttggccagtcaTGTCCTgagtaAG
AACAAAGggtCATTTATcgGGCCaTCTATGCGccgcacatcgcacattcatcaatagtatagctcttcgcaacat
gtaggaTGATGCACTTTcgatatAGACActaattgtCGTCGTGTTGGTTATCAcaattcgctcttatcattcata
aacccattcattatctttgactgcaacacactcgttacAGGTGTGTACAATTCGCAACATTTTTGGgTaGtgagA
GCactgacttggCCGTGATAACAGAAGAGAagtgtgttattTGTaTGCGCACCACTCAACTCATCTtctttcccc
cTCGTTTctcccccgAGCGGcAGtaGGTCCaatAAGATTGTTGCACTTTTGGAAttGGTCAtctcttttgtagct
tgcatttgtatttctctgatccctctattcggaaaaaaagtattgcttaaattatttctgaagtttgtaactgtt
tgttttcagatttaaatagaaaattttatttcactagattttgtagtgcctaaaggcgcacggatttattcagat
aggtctcggcgcgcataaaagtttatggtattttttcgaaatctgagttttgaaaactgatttttaactgttttt
cacagagttattaaa
 
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unc-105 locus Genomic Evodifferences Profile - Relaxed EvoPrint  (Back to Top)

Black capital letters represent bases conserved in all species and colored bases represent sequences present in all species except C.remanei or C.brenneri.

Reference genome repeat sequences: Blue underlining indicates single-copy repeats and Red underlining identifies multi-copy repeats.

gttttcagcttcagctcccctcccccaaaaacttgtgaaaacgaaaaaattcaatttcctgtatttaatctacaa
ttttattgtcgagaattacacaaaaaaatgacgaccagtatcgaaaaatcgagttatcacaagttaccgtacgat
atatgaagggagtgcattcataggaaatgcagaaaaagaaacgggatcataattcgacaaaaatgggtaggtagg
cgaggagagatccgaaaaaacattaaaggataaacacagaggaaacatgaggacaagaccattggacagaaatcc
cagaataatgataataaatttacacacgcaaacacatcgtcgatgttcttcaaacggcaaaaacggcacttcgaa
aagctttgttaaatgattgataactgattctaaaacccagaaacttggtatataataattattggttaaatccaa
ctattctcactacttgcagagtgattaatcggtgttcggatttgatttctttttgatattcctcttatccaattt
tagaggagttcgttgctcgacaggttttggtgctcgtgcccacacctcatttgccatttcttctttaatcttctt
tcttactctctcttcttcttccacaattggatacattcgagcacgaaccttaaatgtttaatttatagagttgtc
caaaattagagaggaattcttacatcatcggaatagtatcttttgaagacagcctctccggaacaatactcggtt
gctttgtaaacatgaagtaatagctgaaaaatattaggatcaaaataaacaatttaaaattaatagaaactcacc
cgagggaagcgtgatgtaaaataatgcaagaactgatctggaatgtctccaagagattgtctgacatcttctggt
aattctctatagtgatgcttcttgttacgcattgctcttagcaaatctcgAACTGAAAATGATTTGTATGTTCTG
AACTTtCTtAaATCTTCCTTCAaaGCaTCaCAAATCTTCTCcCTCCATCCACCgCATACAACTaTtCGAGCATCT
GTTTCTATTCTTCTcacaACTGGACTATTgTCTTCTTCTTTcTCtACaCgATCaGATACATCcGAAAAaTAtGCt
AATCGcTTTTCaGaTGtCCAGAAAAATGgATgatTCAaGAcggcaTCAGCGGTCaatcggtgcaatggcTCCACG
TtcAGCATTGAaGAgATCAAGTCATCAGCCAAcGACCAATCtgcaaaaacactgttatgtgagtaatttccaaaa
ttctatttcttaccATCcAAATCTGCCAAtTTATTCAatGtGtATTCTCCATTtACaATATTtGCTTGtctgtgc
aatgatTTTCCAAAaGGATGAGTaCCCGAGGTtAAcACATAATAGAAAATACATCCAAGTGAGAAGATATCAACt
GGATAAGAaGTaCTtGCAGAaATaAgAACTTCTGGAGCAATCCAGCCATCgGTTCCtGCtAATCCaGAcGCAATa
CCTCTTGAAATtGAATTCTTTCCaGGTTGAACcCtTTTACAAAGaCCaAAATCTGAGATgACTGCtCTCATTTCT
CCtCGCTGaCTaGCCATTGTAATtAGAACATTtTGTGGcTTCATATCTCGATGcACaATTTTtGAaGCATGAAGA
TGTGCCAAtCCATCgGTTGCCTGtttcatAaTGTCTCgtagagcaattgtaacattttgttgaaccTCTTTCTGC
TCaACATAATCATTCAAaGAAGCtATgCAaAGtTCGAGTGCCAAATAtCGAAATTGACTGTCtGATTCCATaCAA
AAGTATCTGATaACGTGtGGATGTGTaTCACTTTCTCGtAaTAAATCcGCTTCTCtgTGaGCaAACTTCACGAAT
TCtGAaACtACTCTCTTtACaGCAACTTCTCTTCCATCAAAaGTTCCTCtATAaACcACAGTTCCtTCaCATCCt
GTtCCAAGAATATCTGATGGACTaTACATCAacTTgCTaCCAACTGCCATCCAACCCTCGGGAATtTCAATtTTT
CTaTTCgCCCATCCAAAGCTTCCACgATTCGAtTGTTTTGATGTCTGAGCACTTCTaGAtTCTCCgGGATTGTTt
ACAATtTCGAAgGAATCCATTCTtgacgTCGACTTCtgtTGATCCCATTGTCTTCCACATTGCCAAATtACAGTT
AATAgtaatgcaaacatcgtaaccagtgtagcatagaatggaataggatgattattgagtagaagcagaatgaaa
gatgtgtcctcatgcttctgtggctcaacaggtcccagaaGTTGTGGTGGAGGcCGTTCaattgtagatccaatt
gccttatgaggTCCAGGAACTGGATATcttgtcgGAATAATCgTTGCCATCGtCATCATTGGTCGATCaTGATAT
CCTGCAAAaaattagtgAAATATTATATcacaCTTCCcctctttCTTCCGTCATtCCTCaaTTCACcCATCACCT
TGAAACtCTCGaacagtgAAAGAATTTCGACAAAAAGAGAGAaaaGGtGGGAGGAGAAGtTAGGAACAAAAGAGA
GAtAGAAGCACATACaAACGAAAAATTCcgctgctCTTCGCACTCTCTTTTTTTctcgcggTGAGTGCGAAATTT
TGCAgaAtGAGAtttgagagctcacctAATAAtAAGTATTCTCCATCcGAAGTTTTATGaGTaATtGATGGaGGA
ATATTtCGaATTATTGGtCtcCGTGGTGGCAagtactcttctttttccatttctgtaagtGCAATtGGaGCTGGA
CCTTCtAGAAGTGGtGGACCaAGAAGTTTTGGaGAaTATGTaATGGTtTGGTgatcgactAGAGCtTCgATaGCA
TAaAgTCCaAATGAaGATTCtCCaACGAATAaaGCtGGGAAGAATTGATTcGTGAggGAtGTTGTtTGAGGaTCt
GCAGCATTgaCACCCaaaACTGTtGGCCATTGaTCcACGGTGAAGATaTTCTGAgAAaaaagagcatagatgaAT
GTATTTCTGATCAGTGACAAATTCTTtgCGATATTATGATaTTTCCCACACtaaaTGTCAATCTTTTGTCATCCC
TTTTAACCTACAAACATTTACAAAAAaaATAAAAAGAGggaAGAGAGAAATCAGAAGCTCAACGAGCCTCCTCGG
GGCGTCATCAACCACCACCTCAGCTGTGTCCAACTGTTGCGTCTTCctgtcggcTCTCGAATACCTCTGGTtagt
ccgtggatcgcCTCTCACACATTCAACAcatacataTACACACACAGATAGAAAAAGATACATGGATGaGATGTG
CAGGAGTGGACGTGtcgatgGtGGTGTCCTGCCtccatcggtcgaagagccaagcttccagaatgaagaaaagaG
CTTGAAACGTAAAATATGATGAATTACGTTTATGATTTCTTCcctctcaatctaccttcatttcatttttctttg
tttattactttagtgtgaaatcttttaaataatattataaaaaattagaataccttttaactttggtaatgtttt
agatataaactatatttcatttacaccttaacaaaaaagaaaatcattagtcaaaaacttcgacattacagtacc
atcattacctaagcttgatcttctgattccacctagacaccagtgatcagaagcgaaaccccattatgtttttct
taacattttcattttgaagacttctttactaccagtgtgatgagatctttgatataaataattagaattctataa
attcttggtatttctaccgtacactctatttagagcctacaaaaaataatgatacTTGAAAATCAAActtaacac
caatgttattatatcttcacaataatgttctaagttcatttttacagtttccggattactgtagttggaatataa
tatactgaataataagaaatgtaccaatatattgtttacaatatttttgtgagaactgAAAATTgAATTTTTTTT
TTAATTTAAAaaTTTCtatatCATtTCAAGAgaatgatAaAGTATgacttattattaatattaaaaaacgcattt
ccaccactgttcccttcgaatctttcatttgCTTTTTGTTTCTCTCTTTTTCATtCCTCTATTATATCATCACAA
gCATTGCACTCaGAAGCCATTTATCACAATATCTCATGTGTGTATGTGTGTGTGTGtcagaagagactcctcgcc
cAATTGAATCAAATCAAATTGCAATTAGTCTTTTTCTttATCATTcaaatgacatgctaattttttcagacaaaa
cgtGCCAATGGGAGCATGGAGAATGCGTCGTCAACTGCcCAgCTATCGATAGATATCGAAGATaATGgaCaGGCA
gcacagttaCCACCACAgCCACCTAGTAGGCATCATCAATGGGCTCAgGATCAaAATCGAAAGAATATGTCaTTT
GAGAAaTCaGGACAcGGTAAAATaatttggtgatgatgAAAATATAAGTtTTAaccgtaaatctagaggttATTC
AAAtattaaggattactgtagatatatttgagttgaagaataatatctaatgatatagtaattaaaagttagaaa
aacaacatttcttataaacaaaatgttttttttgcgtttAAcTTCAtAtTTTCAGCaACACGAAATGCtTCaGAA
GACAGTAAGAACATcaGATTTCttgGAGaccATGCTCCgcCCAgtggagctcgaaAAAGATCTCATAAcAAACGG
TTaCACGAcTGGAGAcggcgactgTCAGTcaatccagaattactgagaaggcatggtaagatctacttattaaaa
tacacacctggtcataggAATCtCaTAGATTAAGATGCAACTaGATTcgcaccgccggtgtcgggcagcCTCCGT
TTTATTAGTTTttgcttTTTTCACCgAAAAAGAAATAGAAGcATGAAAAAGTTATGACGAaGAgcgaggcgcaag
agTTCTTCTTCgctctagaacAAAAGACAACAGAGGGCAGGCATTTTCTTGTGGCTGTGATTCACTTCTCACTTC
ATACATCATTTTGTCGTCTACTaagacaagtatccagcatctaggaatgctgcatcttgcagcttctagaaattc
tcagattaattctagtaagctttccatattcccccaacatgataagtttttgctcaaactctctaatctttcgga
ataacaacgtttgagcacaccttcaaatattcaagtatacagtaagataatctatgaactttatacataaaggaa
actactttaAAACAAAgATTGAACACCaacatgggatTAAAAGTACATTTCCACCTTCGCTTTcaTCTCTtACTC
CCCCAtTTCAaCTATCTTCGTATCGAACCCGTATAGATCATTGgATCTCTCTataTCCCTCTTTtatctgagctc
cAGAGAAAAATCTCTCaccaATcAGCACTTGAcGAtGTACCCTCTATAACACCATCGGCGGgCAACAAATCAACC
CGAACAACatgaagtgaAAGGAGTGAGCaTACACGGATCATCAgccgctgtgaagaaagtGGGAGAcATGatCAT
GTCTGCGGaCTCTCGTTGaaTGGGctctatgGTCTTGaTTTTTTTATTTCTTTTTAACTGCTCAATCAACACATT
CTTacgatacttactacattctcacaaagatacttatcgaaagaatagtgtagaactgaaaaagaAGAAGAAAAT
TAAGTTTTTGGAActtctatctgaatgttgaaccactacaacaatcagtatcagttgcaagaagaagcacaagag
aaaatgtgacacttacaattcgttcaaatcaatcaaaatcagaactttctagagctcaaattttttactttgatt
taaaaattgtctgtctttatcgtctctaatttcaacaaacctctcccaattgtcgctgctcctctcttcggtggt
aggggcccctgtgatgctGTGCCCCGaGTCTAAGAACACCACTTTTTCTCTaCTATTACACaTTCTTCCTAcccC
TCCATtgcggcaCTCATTCCAATCCAATCAGACAGATATTTTGTCACACGAGACGGAAGACACATACACAcACAC
acaacgccaAACAACTATCATACCTATATATCCCCTctaTACCACCACCACCAtcATcgTcaTcAgcgtCTTcaa
CTATCCaagTTCTaACTCAATTCTTCGTCATGCGTCTTCGAaTTCtGACGAAGTCGTCAATAGAAGAATAaaata
attaactcaagatggcAGAAGATAGAATaAAATCAAAATTGCGCCGTCCGGCGTCAATTGAGTCcacgatgTCGA
GCaggactaagccaagacataaaccatctccaatgtcaattctgATGCCACATCTTATgGTTGGAGAATCaTTTC
GTAAATATCGACCaCATGGTAAtacagtagttgagaaagatatttggtaatttgccaaaacagtgcactattttt
agtgtatgtttttaatgcatctccaagatatctAACTTTTCTgcTCATCTTTTTTCTATCATCCCCCTCAAAAAA
CGTTTTGGAGTAACCTGATATCAACAAACGAaATGACACAGCACTCATTTCTgAACTAGAAAAcgAGAAAAGAGC
AACAGCTTTCgactatcaccCAGTGCAAATTTAACTttTTATTTTTATCACTAATTCTTATTCTAatggAAAAAT
CttCAAAaaaTCAattgctaGGGTTTGACCTatcaaatgaagatcCCTATggtgtaTCACATcTTCGGAGGCTaA
GTtCTGGTCGGGAAAAATTTGgAAAAAgtatattatttataacttgATTTTTTTgTTTTCAGGTCTtCgaAACAt
acgGATGaatggtcATTTaGACTGGaaccagctCAGAaaaAGTTTCGAAAAACAGTCAACATTCCACGGAATTTC
ACATGCagctactGCAGATGGAAAATGGAGATGGTaTCTcatcttatattcaattagtaataacctagatatttt
gtTTTCAGGTTCTGGTAcACAGCaTTTACGATATGTCTTCTTGCaCTGCTCATaCAgATATTCTTTCTCATATCA
AAATATCGTCAATAtGGtAAAACGGTCGATCTTGATGTGAGTTagAAGCTTCacctcaataatAACTTTtAAAAA
AATTTTAGCTCAAATTTGAAAACGCTCCATTTCCaTCaATCACAATATGCAATTTaAATCCGTAtAAGAAAAGTG
CAATACAGTCGAATCCtAAtACAAAAGCtATGATGGAAGCaTAcAGTCGACGGATaGGTTCTGGtGAtAAaaCTG
AAGGAATTGCaGCaGCAcTaTCAGCaactGGTGGaCTACATGCtAAAGGTgaattttaagaaactaaatcatgac
AAATTGtttTAAAAAAcctttcacagggtaaagatttttgaaattctaaatataaaaagtcaatatgaaatttca
attgtgcggaaattgcatctaatcttcgaattttctcacacacttccttccaaaaagaattcacactgtttgaaa
atgttttattataaactattcaaattttcttacttttacaataccaAAATTTTCAGTTCGTaGAGCAAAACGAAA
AGCAAAGGGAAAACCAAGGTTACGgGATCGTCGaTATCATCAAGCaTTCGCaCAgTGTCTaTGTGACATTGAACa
gCTAACTGGtGACaGaAAAGGTTCTTGcTTTGCgGCTTTCAAAGGAAAAATAGAaaTCGATACaAATAAtACTGC
TGGTTTTATGAATTTgCATACATCTCGATGTCTTTGTCAACTaGATACggtttctaAAGCACTTTGGCCATGTTT
TCCATGTGAGTTCaTTTTGtacaAATCTagaaagtatgttcacgatTTCAGATTCtTCGTGGAAgGAGAAACTaT
GTTCGGAATGTGTGGATAACACgGGACAcTGTCCAATGAGATTtTAcAAAGGaAATGAacTTTATGAaAATATCA
AaGAgCAAGTtGATtTaTGTCTtTGTCAtAAAGAaTACAAcCATTGTGTTTCtACGaGAGAtGATGGgataatTC
TTGAAATaagcCCaAATGACGAAcTGaatgaTtTGGATATTGGCAAAaaaatcgcatcaCAGTTGAGTGCTCAAC
AGGAAAaacaagccgaagttactactacggaagcaccaacagtgactcaggcgttaggatttgaagaattaactg
atGATATTGCaATtACTTCaCAaGCACAAGAAaATCttATGTTCGCaGTtGGAGAGATGTCaGAaaaaGCgAAGG
AaaGtATGTCCTATGAaTTaGATGAGCTtgTaTTGAAaTGCTCTTTTAATCAaAAAGATTGcCAAATGGATAGGT
atgtattttaatagTCATAAtatatagagaaaattgtTGAAaTTCAGaGAcTTCACgTTgCATTATGATAAcACa
TTTGGAAATTGCTAtACtTTCAAtTAcAATCGAACtGCaGAAGTcgcgtcGCATAGAGCaGGAGCgAAtTATGGt
CTTCGtGTACTGTTATATGCTAATGTTAGTGAgTAtTTACCAACAACTGAAGCtGTCGGaTTTCGGATTACTGTA
CAcGAtAAACACATtGTTCCGTTCCCAGATGCttTTGGTTATTCTGCTCCAACAGGATTtATGTCgTCtTTTGGA
GTtAGAATGGTaAGTTTTgaaattcGAAAATTAtAGAAACTGAtatatataataaagtatggTTTAGAAACAATT
CATaCGtCTcGAACCACCATAcGGACATTGTCGTCACGGAGgAGAagatgcagcgacgtttgtgtaTACTGGTTT
CCAATATTCCGTAGAgGCATGcCATaGaAGTTGTGCTCAGAAAGTGATAGTtGAaGCGTGcGGATGTGCaGATCC
AATGTATCCAgTTGCtGAGATGTTTGGAAataatactAAACCGTGTCAGGCTGTtAATATGGAcCAAAGAGAGTG
cCTCAGaAATACtACActctggTTGGGAGAATTGTATTCaAAAGGAAAAGAAGCaaTcATTCCtGATTGCTACTG
CCATCAgCCTTGCCAGTaAGTtgaaCGtTTTGActcatttacaattctatTATTTtAGAGAgACCAACTATGAAG
TtACaTAtTCATCAGCTCGATGGCCATCaGGaTCCGCAAAGGTTATGGAgTGTtTACCAGGAGACTTTCTtTGCT
TGGAAAAGTATCGAAAGAATGCaGCAATGGTTCAAATaTTCTACGAAGAaTTGAACTATGAAACAATGCAAGAaA
GcCCCGCGTACACtcTcACaTCAGTtCTcGCTGATCTTGGTGGTCTCACAGGTTTATGGATCGGTGCATCagttg
tatcacttcttgaaattgtaactttaatcgtatttgcaacacaagcttatgtcagaaaacggaaagggtgagtcg
atattttttgtttcaaatccctacgttccacctaaaacatcctttgttcacaatctacacttctaatctcatcac
gatactattttgttcatcccaataccctTAGAATAGAGCATGgCCAATAGAAAAAACTAGAGTTGCAcGTTTCGC
ATGGATTCACAgCACACACAACATCACAGATGTCGTGATCCATAtATTGCAGCTCGATtTCGGCCCAATCACATC
ATTCagtacCCGTCCATAGAGCTTCCAGgGttTCATTGAATACTCTTCACAAAAGCAGTACAACtCAAAGTGTcA
AAttaTCTGTGATGGATATTCGATCAATTAAGTCGATCCATTCGAATCATTCGTCGAAAAGCAAACAGTCgATTc
tcaTTGAGGATcTTCCGCCaGCaATtCAGGTAGataattatctcaaatataaaacaagatatatgtaattgcAGG
AgCAAAGTGACGAtgaaGAAGAAACaACaGAATCtTCaaGAACaAAtGGtTCaTGTCGATAtcTGGCgCCTGGaG
AAGATCTTCCgTGTCTTTGcAAgTAtCATCCaGATGGTTCAAtacgaattATGAAAGCaTTaTGTCCcGTaCAtG
GCTAtATGGTTCGTCGAAACTATGACTAcAGGTAGgaTCTTgttttttttcaaaacctaTATTCAAATTCATTCA
ATTCAAGcGTGTCGAAtAGTGAAGAAGAAGACGcaGAAGAcGAaGTTCATCgaGAGCCgGAGCCATTCTATTCTG
CCCCgTATGAGCATCGCAAAAAGTGAGAGAatTAGAGTcAGAAAGAAGAATGGTTTGTTGTGGTACGCACCTTTT
TgtacttgaaaatccatagctagggaatgtttAGATAGATgaaagttacaagaaAGAAGTTTgggtttTTCCTgT
TTTTTTTTTGCACTTCTGTTGAAaTCTATCCTTTCACTTCaTAACACTTTTCCTTgggaaTTCATTTTTCtaaat
aacttctgtaataAAGTTatagcaAAATTCACAAgCAATTTTAGAAGTCAtCCTCACAAAAAATCtgttCAtAAg
AAATCaacaACGGCACTCGATGAaGATCTAGCCATGGAGGCACACAAtGATCCAGAtgGTAATCGACCAGTCTCT
CCAGAAGaACCATAAatcGGTGAATaaagattcccaactcccccaAATCTTAtaTAAATGTACGtTGtATCTCAC
TAAATAtagtttctctcctttTCAAATTTTCACAAACAAAATTGTTCAAGCTTTTCATGTTGctgcTGTCTTTCT
CATTCTCatTGATACAGGTTGTTgatatatAAtTGTTTTCACTGCAATAAATATTGCAAACGTACCTTTGCTACA
TTTTCCATTGTCTCTTTTCCCATCACTTCAAATGGtAATTTGTGcAaTCCATCaTCtCGAAGAAGATAAAgTGCA
ACTacaGGTTGTTTCAGATCttGCTCCCATCTCATTTCTCCTGAAAcAAAATTACatgTTaaTTGAAAatcATTT
TATggatatgaaactaaaTTTAAAATTAaaaaaacaacgtttctatttgatattttataaaccaatatttaacac
atgaactcatgcgAAAAAAGAAacTTTaaattgttgaaaaattcttgacttaatataaataagaaaAGCATTAAA
taattaacgttacatattacccagatgtaaaattttgcgatttttacactacagatactgtacccggcctcgaag
ctaccgaTATTTTtaacccAAAAGatgtgtgtgCCTTTAAggagtactgtatttcaactcctcgtcactgcggag
ttttttttttcaagttttgattccttattcttatttatcgaaaaaaaataagtgaaaattaatggtatcacctca
aattttgaatgagTGAAaacttatgaaacatttaaacgttaaaaattacagtaatccttaaaggcgcaagctttt
ttgtgtttgagaaaagcaatcgcttcaagcccgggcaccgttttttggcgcagaaatcgtaaatttccgaatgtg
ggcagtaatgcaatttgaataattaagaaaaattgaaattcgcctactgaaaaagtctcatcggcgaatagcctc
cgagtttcaagagtttattctgattacgggcaacaaAAAACTTGCcaacagttTATTTTtCAAcaaaaataattt
tttatttattttttcaacaaagataataattttttagctattcacgatttatgtgatcctagcGTTTTCCGTATT
gaTTTTTTGTTggAAATTTgaGCAGgaaaatgTTTTTTtcAATATATTTTtggggaaaaaagtcattttttattt
ggcaattattttttagcttaaatttatatttcaactttctagaaaataactgccttcttcatttttggaacaaat
aatattatttatgtttattctgtttaatttaatattgccacTTACCaGTTTCTcTATCGAAAGTcAGtATATATC
CATGcGAcGAcGATGCATAATGcTTaAATGGCCAcGTATTCACTTCaGGcAaCAAATGgGCAGAATAaTCATTGA
AtGTtGCATTCCAgGTcTTTCCaCGATTCTTtTCATCAAACATAGAgACcCtgTAtTCCGTTCGACCCAAaAAaA
TtGTCTGTTTTTGATTtgcagGGCAGATTCTATCCGCTGAcGCTGAtGAtAGAGTTTCCAcCTGtAAAAATaaAA
TTTTatcagaaatattcaacagtatATATTcAACCTTTAAGCCtGTTTTTGGATCAATTCCAAACCAAACATCTT
TCTTACTTCCtGCGTATAAAATTCCATCATTTCCTTTgCAAGGtGATGCaTGAACTAATTGTGGAATATTGAATG
GAAGTTTTTTCAAaGAACTgTTTTTCAaAACATAAAgtGATCCaTCGAgcggattcggaagaaatgtaaatccct
gtttgacagcagatggagatcgtaaaacaggctctgaaacaaagtaatgTGAATTTTcAAAAcTTAAATTTAAAA
AAttAAACCTTCTTGcAAtGTCCATTTTATtTCTCCcGTCtctGaaTCCAAaGCTCTcaAACGtCCATCaATTGT
cgaaacaagtatagttgaagatgttttctcttcgtcgtctcctattgattcgtgatcctgaacaacGAAAAATAA
TGAAATTTTgTTTTTtgtagtacagAAACTcaCATTccGGAAGCCaGGtGTGCtaaTACAAATTaCAGAgGaGAA
GAGCAGCAAaAAAATaaATGTGaAtAGATGAAatgttgctcTCATTTcaattgcgaaTTATTTTCGaCGcCaAaa
AATCTCCATGAAGACGaGAGCgGGGTTGCTtAGCTGCAAAAACaGAAAAtcAATagagagggtttcacCAAgTGT
TCCACATATTCAAATTTTgcataAAACAACgCGATTGCGAAATTATAaTATTTGTTTTGTtaccaaaacggcgAT
AATAATGTgTGTGtgcgAAATAAGcCAACGTAATAAatggaagGGaTACGGTGCACAaGTACGCAAgtACACgct
gatCCCaAAATGCAGAcatttgtcaaccgtactccagccagccggctgcgaactttttttgaatttttaaacTTT
TCCTTTTTTAgTTTctttttttCACAATtcattcgatcagatcttttttatgttcccagagctcgattcgccttt
tattattcagaataatcatttctcaatcatttgcctcctatttaatttcatgaaaatttcagccttagagtgaaa
gtctttctttcagaaacgataaagttttactaaatcagttttgagaatctaacttgcttaatttctcgttgcaaa
tagcatggaattgtttagaaatatttcgcgcatagaaatgcatattcaaatttgatattggagtggtaaattttt
tgaactcattcagctcattctagctcaccatcatttactttctgtgtctaacttaagatttgatatttttcattt
gttttctaaaAAAACCGATCTGAATGCACTTTTAAGcAATTTTCAACcgattccgaTGTTTGTGTTGACGTTGAC
GTCGACTGACAAACAAATCGgCGAAAAAAGTCAATTTCGATGGGTCGCCAGTGCTGAGAAATCGGAGAGAgaaGA
AGGAGAGTATGCACTTTTGCTGTACGCAAACTTTCTTTTTTTGAAGAGAaaaaGACAtCAgTTTGACAAtCCACT
TGGTCTCACGAAACTGTTTTCACGCCTCTatcCTTTTTTTGCAgAAAAtgcactCAAAGAATGTACATTCtataa
accaacgtttttgtagactttgaaaatacagaccattttcatcagaaattcacatcggttctgagtatattccat
agttgacgacaaatataaacattttccattttctctttatcagacctcaacaaaaattgccttccgtttttacgg
tatgactgtgtatggcttccggttcaactttgttcaatacgttttccacatgcttcaaactttttcagtacttca
caacaaaacagtattgaatttattttcttcaggtctatattttcattttttgaactttataaaagtggtaccatt
gaacaTGCACTGTTTGACCTTTTGCTCcttcacatcagTGATATTTTATGCTTCTTCTtctctcttccatcaTTC
TTCCGATTCATCACCAgGAGaaTTCTCTTTTTTGCAGaCGCCgCTGCTGCGACACGGACACGTATGCGCATGCGC
TCAACTCTCTGcCGTCTCTGCTTTTtgTATTaTTTTttcgtctcgcctcttCCtCGCTTCGTCCTATCGATTCAT
CTATCGGTGGTGCCCTtGCtGTGTCGCCGCGTCGCCAcggccaTTTTTTGtAGTGTCCCTTttacgCTCCCaGCG
CTCACCCCCAGTCACaTcTTCTttgctcagcagttcttcttaaagaacgttagagttctctagaggtgcaagatt
ttaacatcgggctcttctttcaaattttgtgggctctgcttcaattttcctgccgaagcacatgaaaaacaacta
gtcagctatacatttcaatgtttgcgtacgaatcttttgaacacaaaaacgaattaatttcagatattgttgacc
cttttccgccaaaatagccgctctttttcgtGCCCACCTCATtctttttCTGCTCtttGGAGCCATGGCACGATC
ATCTCTGgATTGCAAAATTGCAATATCTTTTAACATCACACTCacCTTCCActAgGATaATCTCcatTCGGCGCA
ACTGCCACTGCTCTAAGCTATCCGATTTCAAAAAGAGGTCAGCTGTGGTGTGTACAAGCAGAAATTATCATTTCC
GTTCTTcacatcacagctagtttcctatttttgtTGATAACCtCAcTGGCTCCaTCTTTCAATAGTTACGGTTTG
TGTATAAcccCGTGTGATCAAtAAACCACGATTGTAAATCAACtgaCTGtTCTTCCTCATtgTCAATCAgATCca
CaATCTGGATACGGAATAAAGGGTATTCCCCGTctgtatgcagattgatatacgtttcggttgtctaactcacta
ttctttttaattttctctgtcccttccaaaacgctgtaatacaatattttaaagaaaagttTAAAGTTCtaAAAT
aTTTCTcatattGAAAGTGCAAAAAACTTGTTTttacatgactgtcacctttTGGCCagtCATGTCCTgagtAAG
AACAAAGGgTCATTTATcGGGCCATCTATGCGCcgcacatcGCACaTTCATCAATagTATagCTCTTCGCAACAT
GTaggATGATGCACTTTCGATATAGACACTAATTGTCGTCGTGTTGGTTATCAcAATtCGCTctTATCATTcata
aACCCAttcATTATCTTTGACTGCAAcacACTCGTtACAGGTGTGTACAATTCGCAACATTTTTGGGTAGTGAGA
GCACtgacttGGCCGTGATAACAGAAGAGAAGTGTGTTATTTGTATGCGCACCACTCAACTCATCTTctttCCCc
CTCGTTTCTCCCCCGAGCGGcAGTAGGTCCAATAAGATTGTTGCACTTTTGGAATTGGTCATCTCTtTTGTAgct
tgcatttgtatttctctgatccctctattcggaaaaaaagtattgcttaaattatttctgaagtttgtaactgtt
tgttttcagatttaaatagaaaattttatttcactagattttgtagtgcctaaaggcgcacggatttattcagat
aggtctcggcgcgcataaaagtttatggtattttttcgaaatctgagttttgaaaactgatttttaactgttttt
cacagagttattaaaa
 
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Enhanced BLAT Score Card  (Back to Top)

 Nematode EvoPrinterHD - Generate EvoPrint and EvoDifferences Profile

 Gene Name: unc-105 locus
 Reference Genome: C.elegans
 Click on individual Species and Composite eBLATs to view eBLAT alignments.
Score =   Total number of aligning bases.
Start/End =   First and last aligning bases in reference sequence.
Ns =   # of Sequence gap(s).

  View test species eBLAT to identify gap(s).

R/D =   Sequence rearrangements and/or duplications.
  R =   Total # of aligning bases unique to the 2nd or 3rd eBLAT
  D =   Total # of common aligning bases
Red =   Common to 1st, 2nd and 3rd eBLATs
Brown =   Common to the 1st and 2nd eBLATs
Magenta =   Common to the 1st and 3rd eBLATs
  C.elegans (Ref Sequence)
  Score Start End Ns R/D
  15691 1 156910308 
  333 11108 156680 0 / 25
  356 11055 156680 0 / 48
  All Alignments 1st None

  C.remanei
  Score Start End Ns R/D
  7091 951 15447122 
  146 3969 125400 69 / 16
  122 3969 116750 54 / 7
  All Alignments 1st None

  C.briggsae
  Score Start End Ns R/D
  4856 572 154475 
  403 4921 62181 403 / 0
  198 7335 112140 192 / 6
  All Alignments 1st None

  C.brenneri
  Score Start End Ns R/D
  2884 6591 154361 
  1838 1216 76991 504 / 410
  1088 1357 63972 164 / 0
  All Alignments 1st None

  P.pacificus
  Score Start End Ns R/D
  122 3210 130810 
  136 5042 136040 136 / 0
  103 11306 126670 85 / 18
  All Alignments 1st None